From: Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse
Gene locus | Motifs* | GH family | SP | MS | Description | log2 Cy5/Cy3 ratio** | ||||
---|---|---|---|---|---|---|---|---|---|---|
 | Sequence | Location | Orientation |  |  |  |  | 6 hours | 12 hours | 24 hours |
An03g03740 |  |  |  | GH1 | No | No | β-glucosidase (bgl4) | 4.22 | 3.53 | 4.04 |
An11g02100 | GGCTAG | 249 | 1 | GH1 | Yes | No | β-glucosidase |  |  |  |
An15g04800 | TTAGCC | -178 | -1 | GH3 | Yes | No | β-1.2-D-glucosidase (b2tom) | 1.90 | 0.37 | 1.85 |
An07g07630 | GGCTAA | -180 | 1 | GH3 | Yes | No | β-glucosidase | 4.88 | 3.67 | 3.21 |
An17g00520 |  |  |  | GH3 | No | No | β-glucosidase precursor (bgluc) | 5.34 | 5.49 | 5.23 |
An18g03570 |  |  |  | GH3 | Yes | Yes | β-glucosidase (bgl1) | 6.06 | 3.55 | 4.31 |
An11g00200 |  |  |  | GH3 | Yes | No | β-glucosidase (bgln) | 6.23 | 5.34 | 5.94 |
An11g06090 | CTAGCC GGCTAA | -69 -482 | -1 1 | GH3 | Yes | No | β-glucosidase 2 (bgl2) | 5.44 | 4.62 | 3.19 |
An03g01050 |  |  |  | GH5 | Yes | No | Endo-β-1.4-glucanase | 3.75 | 0.92 | 2.58 |
An01g11670 |  |  |  | GH5 | Yes | No | Endo-β-1.4-glucanase A (eglA) | 6.25 | 6.97 | 6.86 |
An07g08950 | GGCTAA | -128 | 1 | GH5 | Yes | No | Endo-β-1.4-glucanase B | 8.21 | 8.03 | 8.16 |
An08g01760 | TTAGCC | -185 | -1 | GH6 | Yes | No | Exocellobiohydrolase | 5.07 | 3.47 | 2.73 |
An12g02220 |  |  |  | GH6 | Yes | Yes | Cellulose 1.4-β-cellobiosidase II (cbh2) | 6.03 | 6.15 | 7.36 |
An07g09330 |  |  |  | GH7 | Yes | No | 1.4-β-D-glucan cellobiohydrolase A precursor (cbhA) | 5.95 | 5.83 | 3.89 |
An01g11660 | GGCTAG TTAGCC | -417 -157 | 1 1 | GH7 | Yes | No | 1.4-β-D-glucan cellobiohydrolase B precursor (cbhB) | 7.43 | 6.91 | 6.58 |
An14g02760 | Â | Â | Â | GH12 | Yes | No | Endoglucanase A (eglA) | 7.88 | 6.85 | 6.35 |
An12g04610 | Â | Â | Â | GH61 | Yes | No | Similarity to endoglucanase IV (egl4) | 6.78 | 6.40 | 6.59 |
An01g01870 | GGCTAA | -394 | 1 | GH74 | Yes | No | Avicelase III | 4.69 | 4.52 | 4.15 |