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Table 3 Expressed cellulase- and hemicellulose-degrading enzymes of Neocallimastix patriciarum arranged by GH familya

From: Functional characterization of cellulases identified from the cow rumen fungus Neocallimastix patriciarum W5 by transcriptomic and secretomic analyses

 

Cellulase

Hemicellulase

Putative GH family

1

3

5

6

7

9

12

45

48

61

10

11

26

29

43

51

53

54

62

67

74

95

Neocallimastix patriciarum W5

7

10

20b

33b

 

12b

 

14b

12b

 

21b

15b

4b

 

20b

 

1

     

Neurospora crassa OR74A

1

9

7

3

5

 

1

1

 

14

4

2

1

 

7

1

1

1b

 

1b

1

 

Magnaporthe grisea 70-15

2

19

13

3

6b

 

3

1

 

17

5

5

 

4b

19

3

1

1b

3b

1b

1

1

Aspergillus nidulans FGSC A4

3

20

15

2

3

 

1

1

 

9

3

2

3

 

15

2

1

1b

2

1b

2b

3b

Aspergillus niger CBS 513.88

3

17

10

2

2

 

4b

  

7

1

4

1

1

10

4b

2b

1b

1

1b

1

2

Aspergillus oryzae RIB40

3

23b

14

1

3

 

4b

  

8

4

4

1

 

20b

3

1

1b

2

1b

 

3b

Leptosphaeria maculans v23.1.3

3

13

15

3

3

 

3

2

 

20b

3

2

1

1

11

3

1

 

1

1b

 

1

Trichoderma reesei c

2

13

11

1

2

 

2

1

 

2

1

3

  

2

   

1

1b

  
  1. aGH: glycosyl hydrolase; CAZy: Carbohydrate-Active enZYmes database. bHighest gene number among fungi from JGI database and CAZy annotation. cAdapted from JGI database.