Table 4 Predicted Aspergillus niger transporter-encoding genes that have increased mRNA accumulation during growth on steam-exploded sugarcane bagasse compared to growth on fructose reference control
From: Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse
| Gene locus | Motifs* | Description | log2 Cy5/Cy3 ratio** | ||||
|---|---|---|---|---|---|---|---|
| Sequence | Location | Orientation | 6 hours | 12 hours | 24 hours | ||
| An01g00850 |
CTAGCC GGCTAA |
-376 -385 |
-1 1 | Similarity to xylose permease (xylT) | 4.04 | 3.91 | 3.79 |
| An06g00260 | CTAGCC | -49 | -1 | Strong similarity to hexose transporter (hxt5) | 5.87 | 4.36 | 6.23 |
| An06g00620 | Strong similarity to α-glucoside-hydrogen symporter (mal11) | 7.19 | 4.73 | 5.96 | |||
| An11g03700 | Strong similarity to hexose transporter (hxt1) | 1.33 | 1.97 | 2.64 | |||
| An12g09270 | GGCTAA | -356 | 1 | Strong similarity to lactose permease (lac12) | 3.52 | 4.44 | 2.94 |
| An15g04270 | Strong similarity to quinate transport protein (qutD) | 5.07 | 6.02 | 8.29 | |||
| An15g05440 | TTAGCC | -6 | -1 | Strong similarity to high-affinity glucose transporter (hgt1) | 3.85 | 3.02 | 2.86 |