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Table 3 QTLs for growth traits, seed characters

From: An approach for jatropha improvement using pleiotropic QTLs regulating plant growth and seed yield

  Trait QTLa Linkage Group Marker PositionbcM LOD Peak R2 c (%) Additive Effectsd
Growth H4m qH4m-3 3 Jcuint179 55.8 3.50 5 −17.51
qH4m-7 7 Jatr610 71.9 2.97 4.4 −10.31
H10m qH10m-3 3 Jatr1054 11.9 3.55 6.3 21.53
qH10m-5 5 Jatr945 42.1 5.81 8.5 21.99
qH10m-6 6 Jcuint312 25.3 2.56 4 −15.80
qH10m-9 9 Jatr859 5.0 3.09 4.5 16.30
qH10m-10 10 Jcuint081 20.6 4.63 6.7 −19.25
D4m qD4m-5 5 OleI 31.3 3.88 5.6 0.26
qD4m-9 9 Jatr698 24.6 2.70 5.2 0.25
qD4m-11 11 Jatr684 14.3 2.98 4.6 0.25
D10m qD10m-3a 3 Jatr1054 11.9 8.11 12.7 0.96
qD10m-3b 3 Jcuint048 59.9 3.85 4.9 −0.68
qD10m-5 5 Jatr746 38.3 15.03 21.1 1.11
BN4m qBN4m-6 6 Jcuint036 64.3 4.04 6.9 −1.26
BN10m qBN10m-1 1 Jatr722 54.1 3.44 5.6 2.04
qBN10m-4 4 Jatr854 41.0 3.51 5.5 −2.19
qBN10m-6 6 Jcuint111 93.4 3.58 5.9 −2.28
TBN qTBN-7 7 Jatr610 68.9 3.40 8.4 1.30
BNPB qBNPB-5 5 Jatr739 46.2 2.98 7.9 0.62
Flower, Fruit and seed yield FFN qFFN-2 2 Jatr691 20.7 2.00 4.5 1.20
   qFFN-5 5 OleI 30.3 3.38 7 1.56
   qFFN-6 6 Jatr301 15.8 6.41 13.6 −2.21
   qFFN-7 7 Jcuint151 2.0 4.16 9.6 1.97
  FruitNo qFruitNo-1 1 Jatr749 42.4 2.47 5.5 5.54
   qFruitNo-6 6 Jatr839 28.3 4.97 12.4 −7.61
   qFruitNo-7 7 Jatr866 64.8 3.15 7.3 5.65
  TSW qTSW-5 5 Jcuint002 33.7 2.24 5.2 29.33
   qTSW-7 7 Jatr866 66.8 2.70 4.9 26.31
  1. a QTL: starting with “q,” followed by an abbreviation of the trait name, the name of the linkage group, and the number of QTL affecting the trait on the linkage group. b Position from the first marker on each linkage group. c Coefficient of determination or the percentage of variance explained (PVE) by the detected QTL. d Estimated phenotypic effect of substituting J. integerrima alleles with J. curcas alleles at QTL.