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Table 8 Identified bacterial wall-degrading proteins and spectrum counts on 1, 3, 7, and 14 days

From: A time course analysis of the extracellular proteome of Aspergillus nidulans growing on sorghum stover

  

Spectrum countc

 

Accession numbera

GH familya

Identified proteinsa

MW (kDa)b

Day 1

Day 3

Day 7

Day 14

SignalPd

AN6470

GH25

Putative N,O-diacetyl muramidase

23

32

32

23

17

Y

AN8969

GH25

N,O-diacetylmuramidase

23

0

12

0

0

Y

  1. aAccession numbers along with protein information and glycosyl hydrolase (GH) family information was obtained from Pedant [23].
  2. bHypothetical molecular weight of the proteins.
  3. cQuantifying changes in protein abundance between samples from different time points was done using the spectral count method, yielding a semiquantitative analysis.
  4. dSignalP was used to predict secretion signals [23, 24].