Table 2 Genes encoding the β-ketoadipate pathway and peripheral reactions

catA (002058)

CatA

304

Catechol 1,2-dioxygenase

Lutiella nitroferrum 2002

80/304

ZP_03698425.1

catB (007569)

CatB

142

Muconate cycloisomerase

Cupriavidus basilensis OR16

91/382

ZP_09625347.1

catC1 (007567)

CatC1

92

Muconolactone δ-isomerase

Cupriavidus basilensis OR16

93/92

ZP_09625348.1

catC2 (006855)

CatC2

91

Muconolactone δ-isomerase

Alicycliphilus denitrificans BC

79/92

YP_004127266.1

catD (006858)

CatD

273

3-oxoadipate enol-lactonase

Acidovorax avenae subsp. avenae ATCC 19860

68/273

YP_004236298.1

catR (002057)

CatR

307

Transcriptional activator (LysR family)

Burkholderia cenocepacia J2315

83/307

YP_002233374.1

benA (002059)

BenA

462

Benzoate dioxygenase large subunit

Cupriavidus basilensis OR16

96/462

ZP_09623640.1

benB (002060)

BenB

166

Benzoate dioxygenase small subunit

Cupriavidus basilensis OR16

93/166

ZP_09623641.1

benC (002061)

BenC

339

Benzoate dioxygenase reductase subunit

Cupriavidus metallidurans CH34

77/339

YP_587015.1

benD (002063)

BenD

108

2-Hydro-1,2-dihydroxybenzoate dehydrogenase

Ralstonia eutropha JMP134

91/108

YP_298602.1

pobA (007971)

PobA2

389

4-Hydroxybenzoate 3-Monooxygenase

Cupriavidus basilensis OR16

92/389

ZP_09625369.1

pobB (001362)

PobA1

394

4-Hydroxybenzoate 3-Monooxygenase

Pseudomonas putida W619

92/394

YP_001748818.1

pcaB (001344)

PcaB

453

3-Carboxy-cis,cis-muconate cycloisomerase

Streptomyces hygroscopicus ATCC 53653

70/453

ZP_07293737.1

pcaC1 (003089)

PcaC1

125

4-Carboxymuconolactone decarboxylase

Pseudomonas fulva 12-X

82/125

YP_004473183.1

pcaC2 (005251)

PcaC2

139

4-Carboxymuconolactone decarboxylase

Cupriavidus basilensis OR16

90/139

ZP_09624697.1

pcaD1 (000893)

PcaD1

280

3-Oxoadipate enol-lactonase

Cupriavidus basilensis OR16

86/280

ZP_09627578.1

pcaD2 (006858)

PcaD2

273

3-Oxoadipate enol-lactonase

Acidovorax avenae subsp. avenae ATCC 19860

68/273

YP_004236298.1

pcaF (003109)

PcaF

400

β-Ketoadipyl CoA thiolase

Cupriavidus basilensis OR16

98/400

ZP_09627621.1

pcaG (002623)

PcaG

192

Protocatechuate 3,4-dioxygenase, α subunit

Cupriavidus basilensis OR16

88/192

ZP_09628855.1

pcaH (002624)

PcaH

241

Protocatechuate 3,4-dioxygenase, β subunit

Cupriavidus basilensis OR16

93/241

ZP_09628856.1

pcaI1 (003111)

PcaI1

227

β-Ketoadipate succinyl-CoA transferase α subunit

Ralstonia eutropha H16

93/227

YP_728364.1

pcaI2 (000701)

PcaI2

252

β-Ketoadipate succinyl-CoA transferase α subunit

Burkholderia xenovorans LB400

75/252

YP_554660.1

pcaI3 (003203)

PcaI3

251

β-Ketoadipate succinyl-CoA transferase α subunit

Bordetella petrii DSM 12804

57/251

YP_001632201.1

pcaI4 (002146)

PcaI4

233

β-Ketoadipate succinyl-CoA transferase α subunit

Cupriavidus basilensis OR16

95/233

ZP_09628963.1

pcaJ1 (003112)

PcaJ1

215

β-Ketoadipate succinyl-CoA transferase β subunit

Cupriavidus basilensis OR16

95/215

ZP_09627620.1

pcaJ2 (000700)

PcaJ2

220

β-Ketoadipate succinyl-CoA transferase β subunit

Bordetella petrii DSM 12804

68/220

YP_001633147.1

pcaJ3 (003202)

PcaJ3

211

β-Ketoadipate succinyl-CoA transferase β subunit

Cupriavidus basilensis OR16

91/211

ZP_09626665.1

pcaJ4 (002145)

PcaJ4

205

β-Ketoadipate succinyl-CoA transferase β subunit

Cupriavidus basilensis OR16

99/205

ZP_09628964.1

pcaK (003417)

PcaK

446

4-Hydroxybenzoate transporter

Cupriavidus basilensis OR16

93/446

ZP_09623076.1

pcaL (006326)

PcaL

399

3-Oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase

Ralstonia eutropha H16

74/399

YP_841800.1

pcaQ (002625)

PcaQ

266

Transcriptional regulator (LysR family)

Cupriavidus basilensis OR16

77/266

ZP_09628857.1

pcaT (001951)

PcaT

436

β-Ketoadipate transporter

Pseudomonas syringae pv. phaseolicola 1448A

78/436

YP_276146.1

hcaA (005714)

HcaA

280

ρ-Hydroxycinnamoyl-CoA hydratase/lyase

Burkholderia glumae BGR1

93/280

YP_002908324.1

hcaB (005963)

HcaB

397

Vanillin dehydrogenase

Burkholderia thailandensis MSMB43

86/397

ZP_02469116.1

hcaC (001154)

HcaC

620

Feruloyl-CoA synthase

Azotobacter vinelandii DJ

56/620

YP_002801316.1

hcaD1 (003030)

HcaD1

395

Acyl-CoA dehydrogenase

Cupriavidus basilensis OR16

95/395

ZP_09626604.1

hcaD2 (003645)

HcaD2

383

Acyl-CoA dehydrogenase

Cupriavidus basilensis OR16

95/383

ZP_09624899.1

vanA1 (007066)

VanA1

351

Vanillate-O-demethylase oxygenase subunit

Ralstonia solanacearum MolK2

80/351

CAQ18072.1

vanA2 (001443)

VanA2

340

Vanillate-O-demethylase oxygenase subunit

Cupriavidus metallidurans CH34

38/340

YP_587674.1

vanB1 (007067)

VanB1

315

Vanillate-O-demethylase reductase subunit

Pseudomonas syringae pv. tomato str. DC3000

56/315

NP_792703.1

vanB2 (001445)

VanB2

315

Vanillate-O-demethylase reductase subunit

Halomonas elongata DSM 2581

55/315

YP_003899010.1

vanR (7065)

VanR

258

Transcriptional regulator (GntR family)

Cupriavidus basilensis OR16

92/258

ZP_09625218.1

hcaK (002970)

HcaK

371

Hydroxycinnamate transporter

Ralstonia eutropha JMP134

84/371

YP_299063.1

hcaR (002968)

HcaR

164

Transcriptional activator (MarR family)

Ralstonia eutropha JMP134

75/164

YP_299066.1

hcaX (002969)

HcaX

404

Porin transmembrane protein

Ralstonia eutropha JMP134

88/404

YP_299064.1