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Table 4 Genes encoding gentisate pathways and peripheral reactions

From: Characterization and genomic analysis of kraft lignin biodegradation by the beta-proteobacterium Cupriavidus basilensis B-8

Gene (orf no.)1 Gene product Size (aa)2 Function Organism % Identity/aa Accession no.
hybR (000498) HybR 306 LysR-like regulator protein Ralstonia solanacearum UW551 80/306 ZP_00946271.1
hybA (000499) HybA 328 Putative ferredoxin oxidoreductase Ralstonia solanacearum Po82 70/328 YP_006030105.1
hybB (000500) HybB 418 Salicylate-5-hydroxylase large oxygenase component Ralstonia solanacearum UW551 83/418 ZP_00946273.1
hybC (000501) HybC 157 Salicylate-5-hydroxylase small oxygenase component Ralstonia solanacearum MolK2 72/157 CAQ37385.1
hybD (000502) HybD 103 Salicylate 5-hydroxylase ferredoxin component Achromobacter xylosoxidans A8 66/103 YP_195869.1
mhbR (003412) MhbR 319 Transcriptional regulator (LysR family) Cupriavidus necator N-1 77/316 YP_004681033.1
mhbD (003413) MhbD 348 Gentisate 1,2-dioxygenase Cupriavidus basilensis OR16 95/348 ZP_09623073.1
mhbH (003414) MhbH 232 Fumarylacetoacetate hydrolase Cupriavidus basilensis OR16 91/232 ZP_09623074.1
mhbI (003415) MhbI 214 Maleylpyruvate isomerase Ralstonia eutropha H16 76/214 YP_729032.1
mhbM (003416) MhbM 413 3-Hydroxybenzoate-6-hydroxylase Burkholderia multivorans CGD1 82/413 ZP_03585707.1
mhbT (003417) MhbT 446 Putative 3-hydroxybenzoate transporter Burkholderia sp. NCIMB 10467 59/446 ABW22835.1
  1. a. Indicates the open reading frame number in the Additional file 1.
  2. b. aa, number of amino acids.