Skip to main content

Table 3 Comparison of ratios derived from RNA-seq and from RT-PCR analysis for selective genes

From: Integrated OMICS guided engineering of biofuel butanol-tolerance in photosynthetic Synechocystissp. PCC 6803

Gene ID

Description

RT-PCR ratio

RNA-Seq ratio

sll0221

Bacterioferritin comigratory protein

−1.18

−1.87

sll0248

Flavodoxin

1.31

3.67

sll0629

Photosystem I reaction center subunit PsaK 2

1.05

1.11

sll1327

ATP synthase gamma chain

1.29

1.10

sll1734

Hypothetical protein

1.52

1.29

sll1796

Cytochrome c6

1.74

2.38

slr0288

Glutamate--ammonia ligase

4.47

2.28

slr0952

Fructose-1,6-bisphosphatase class 1

−1.52

1.36

slr1828

Ferredoxin

1.96

3.33

slr1909

NarL subfamily response regulator

1.50

1.06