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Table 3 Comparison of ratios derived from RNA-seq and from RT-PCR analysis for selective genes

From: Integrated OMICS guided engineering of biofuel butanol-tolerance in photosynthetic Synechocystissp. PCC 6803

Gene ID Description RT-PCR ratio RNA-Seq ratio
sll0221 Bacterioferritin comigratory protein −1.18 −1.87
sll0248 Flavodoxin 1.31 3.67
sll0629 Photosystem I reaction center subunit PsaK 2 1.05 1.11
sll1327 ATP synthase gamma chain 1.29 1.10
sll1734 Hypothetical protein 1.52 1.29
sll1796 Cytochrome c6 1.74 2.38
slr0288 Glutamate--ammonia ligase 4.47 2.28
slr0952 Fructose-1,6-bisphosphatase class 1 −1.52 1.36
slr1828 Ferredoxin 1.96 3.33
slr1909 NarL subfamily response regulator 1.50 1.06