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Table 1 The set of inter-modular linkers used for cloning

From: A synthetic biology approach for evaluating the functional contribution of designer cellulosome components to deconstruction of cellulosic substrates

Source organism

Scaffoldin

Module

C-terminal linker

Length (a.a)

Sequence

Accession code

A. cellulolyticus

ScaC

Coh A

Long

29

PTPTQSATPTVTPSATATPTQSATPTVTP

AAP48996

Short

5

PTPTQ

None

—

—

B. cellulosolvens

ScaB

Coh B

Long

27

TPTNTISVTPTNNSTPTNNSTPKPNPL

AAT79550

Short

5

TPTNT

None

—

—

C. thermocellum

CipA

Coh T

Long

35

PTKGATPTNTATPTKSATATPTRPSVPTNTPTNTP

ABN54273

Short

5

PTKGA

 

None

—

—

CBM (c)

Long

31

VVPSTQPVTTPPATTKPPATTKPPATTIPPS

ABN54273

 

Short

5

VVPST

 
   

None

—

—

 
  1. The preceding module of each linker is indicated. Coh A: the third cohesin of ScaC from A. cellulolyticus, Coh B: the third cohesin of ScaB from B. cellulosolvens, Coh T: The second cohesin of CipA from C. thermocellum, CBM (c): the carbohydrate binding module CBM3a of CipA from C. thermocellum.