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Table 1 Misclassified species in the SVM analyses

From: De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes

  eSVMbPFAM eSVMCAZY_B
False negatives Postia placenta Mad-698-R Thermomonospora curvata DSM 43183
Xylanimonas cellulosilytica DSM 15894  
Thermomonospora curvata DSM 43183  
False positives Actinosynnema mirum 101 Actinosynnema mirum 101
Arthrobacter aurescens TC1
Thermotoga lettingae TMO
  1. Shown are species which were misclassified with the eSVMCAZY_B and the eSVMbPFAM classifiers. Contrary to previous beliefs [22], recent literature indicates in agreement with our predictions that T. curvata is a non-degrader. Furthermore, recent evidence supports that A. mirum is a lignocellulose degrader, which has not been previously described [23].