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Table 4 The 21 most prevalent genera of taxonomic classification of sample BE based on read counts

From: A pyrosequencing-based metagenomic study of methane-producing microbial community in solid-state biogas reactor

Phylum

Class

Order

Family

Genus

Counts of reads

Firmicutes

Clostridia

Clostridiales

Clostridiaceae

Clostridium

17,975

 

Clostridia

Clostridiales

Syntrophomonadaceae

Aminobacterium

11,870

 

Clostridia

Clostridiales

Peptostreptococcaceae

Anaerococcus

6,544

 

Clostridia

Clostridiales

Syntrophomonadaceae

Syntrophomonas

4,698

 

Clostridia

Clostridiales

Clostridiaceae

Alkaliphilus

2,637

 

Bacilli

Lactobacillales

Enterococcaceae

Enterococcus

1,948

 

Bacilli

Lactobacillales

Streptococcaceae

Streptococcus

2,462

 

Clostridia

Clostridiales

Syntrophomonadaceae

Thermanaerovibrio

1,123

 

Bacilli

Bacillales

Bacillaceae

Bacillus

1,282

 

Clostridia

Thermoanaerobacteriales

Thermoanaerobacteriaceae

Thermoanaerobacter

2,302

 

Bacilli

Lactobacillales

Lactobacillaceae

Lactobacillus

1,907

Bacteroidetes

Bacteroidetes

Bacteroidales

Bacteroidaceae

Bacteroides

5,655

 

Bacteroidetes

Bacteroidales

Porphyromonadaceae

Parabacteroides

1,295

Proteobacteria

Gammaproteobacteria

Pseudomonadales

Moraxellaceae

Psychrobacter

7,823

 

Gammaproteobacteria

Pseudomonadales

Pseudomonadaceae

Pseudomonas

2,850

 

Gammaproteobacteria

Enterobacteriales

Enterobacteriaceae

Enterobacter

1,339

Chloroflexi

Chloroflexi

Chloroflexales

Chloroflexaceae

Roseiflexus

968

Thermotogae

Thermotogae

Thermotogales

Thermotogaceae

Kosmotoga

1,738

Euryarchaeota

Methanomicrobia

Methanosarcinales

Methanosarcinaceae

Methanosarcina

6,522

 

Methanomicrobia

Methanomirobiales

Methanomicrobiaceae

Methanoculleus

1,102

 

Methanomicrobia

Methanosarcinales

Methanosaetaceae

Methanosaeta

750

  1. # Read counts matched to the 21 most abundant microbial genera. The results were obtained from the best BLASTx hits by searching the nucleotide sequence database of NCBI GenBank.