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Table 3 Saccharomyces cerevisiae strains used in this study

From: Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation

Strain name

Description

Source

BY4741

MAT a his 3Δ1 leu 2Δ met 15Δ ura 3Δ

Euroscarfa

Yeast KO collection

MAT a his 3Δ1 leu 2Δ met 15Δ ura 3Δ ORFΔ::KanMX

OpenBiosystemsb

CEN.PK113-7D

MATa

Euroscarfa

CEN.PK113-1A

MATα

Euroscarfa

IMK439

MATα ura3Δ::KanMX

This study

IMK440

MATa ura3Δ::KanMX

This study

Deletion strains*

MATa ORFΔ::KanMX

This study

Overexpression strains*

MATa ORFpr::KanMX-TPI1pr::ORF

This study

IMS0344

MATa rpn4-1 rtg1-1 ubr1-1 ssk2-1

This study

IMS0345

MATa/MATα RPN4/rpn4-1 RTG1/rtg1-1 UBR1/ubr1-1 SSK2/ssk2-1 URA3/ura3Δ::KanMX

This study

IMS0346

MATα rpn4-1 rtg1-1 ubr1-1 ssk2-1

This study

IMS0347

MATa/MATα RPN4/rpn4-1 RTG1/rtg1-1 UBR1/ubr1-1 SSK2/ssk2-1 URA3/ura3Δ::KanMX

This study

IMS0348

MATα rpn4-1 rtg1-1 ubr1-1 ssk2-1

This study

IMS0349

MATa/MATα RPN4/rpn4-1 RTG1/rtg1-1 UBR1/ubr1-1 SSK2/ssk2-1 URA3/ura3Δ::KanMX

This study

IMS0350

MATa rpn4-1 rtg1-1 ssk2-1

This study

IMS0351

MATa rpn4-2 rtg1-2 ubr1-2 nma111-2 rpl10-2 sto1-2 sst4-2

This study

IMS0352

MATa/MATα RPN4/rpn4-2 RTG1/rtg1-2 UBR1/ubr1-2 NMA111/nma111-2 RPL10/rpl10-2 STO1/sto1-2 SST4/sst4-2 URA3/ura3Δ::KanMX

This study

IMS0353

MATa rpn4-2 rtg1-2 nma111-2 rpl10-2

This study

IMS0354

MATa/MATα RPN4/rpn4-1 RTG1/rtgi-2 NMA111/nma111-2 RPL10/rpl10-2 URA3/ura3Δ::KanMX

This study

IMS0355

MATa rpn4-2 rtg1-2 nma111-2 rpl10-2

This study

IMS0356

MATa/MATα RPN4/rpn4-2 RTG1/rtg1-2 NMA111/nma111-2 RPL10/rpl10-2 URA3/ura3Δ::KanMX

This study

IMS0357

MATa rpn4-2 rtg1-2 nma111-2

This study

IMI218

MATa RPN4pr::KanMX RPN4pr-rpn4-1

This study

IMI238

MATa RTG1pr::KanMX RTG1pr-rtg1-1

This study

  1. * the complete list of the deletion and overexpression strains is provided in Additional file 1: Table S1. ahttp://web.uni-frankfurt.de/fb15/mikro/euroscarf/, bhttp://www.thermoscientificbio.com/molecular-biology/.