Table 5 Selected protein families (Pfam) used for the identification of corresponding metagenomic sequences
Pfam accession | Pfam name |
|---|---|
PF00161 | Ribosome inactivating protein |
PF01123 | Staphylococcal/Streptococcal toxin |
PF01375 | Heat-labile enterotoxin alpha chain |
PF01376 | Heat-labile enterotoxin beta chain |
PF01742 | Clostridial neurotoxin zinc protease |
PF02048 | Heat-stable enterotoxin |
PF02258 | Shiga-like toxin beta subunit family |
PF02876 | Staphylococcal/Streptococcal toxin |
PF03278 | IpaB/EvcA family |
PF03318 | Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 |
PF03496 | ADP-ribosyltransferase exoenzyme |
PF03495 | Clostridial binary toxin B/anthrax toxin PA |
PF03505 | Clostridium enterotoxins |
PF05105 | Holin family |
PF05588 | Clostridium botulinum HA-17 protein |
PF05833 | Fibronectin-binding protein A N-terminus |
PF05946 | Toxin-coregulated pilus subunit TcpA |
PF06340 | Vibrio cholerae toxin co-regulated pilus biosynthesis protein F |
PF06511 | Invasion plasmid antigen |
PF07212 | Hyaluronidase protein |
PF07373 | CAMP factor |
PF07906 | ShET2 enterotoxin, N-terminal region |
PF07951 | Clostridium neurotoxin, C-terminal receptor binding |
PF07952 | Clostridium neurotoxin, Translocation domain |
PF07953 | Clostridium neurotoxin, N-terminal receptor binding |
PF07968 | Leukocidin/Hemolysin toxin family |
PF08090 | Heat stable E. coli enterotoxin 1 |
PF08470 | Nontoxic nonhaemagglutinin C-terminal |
PF09052 | Salmonella invasion protein A |
PF09599 | Salmonella-Shigella invasin protein C |
PF10671 | Toxin co-regulated pilus biosynthesis protein Q |
PF12918 | TcdB toxin N-terminal helical domain |
PF12919 | TcdA/TcdB catalytic glycosyltransferase domain |
PF12920 | TcdA/TcdB pore forming domain |