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Table 6 Numbers and assignments of BLASTn analyses of metagenomic reads against nucleotide sequences of the MvirDB database

From: Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms

  B55 S55a S65a S70a G5a G30a U1a
Reads assigned 7,054 8,736 10,247 11,805 9,481 9,457 7,597
Status “virulence factor” b 3,791 4,552 5,531 6,187 5,174 5,130 3,817
Virulence protein 3,143 3,782 4,559 5,100 4,305 4,242 3,216
Antibiotic resistance 332 420 510 630 479 464 328
Transcription factor 188 144 181 140 215 232 133
Protein toxin 74 104 175 222 89 100 73
Differential gene regulation 54 85 106 95 86 92 66
  1. a Numbers of reads are normalized to an equal sample size (sample B55).
  2. b As defined in the MvirDB database.