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Table 6 Numbers and assignments of BLASTn analyses of metagenomic reads against nucleotide sequences of the MvirDB database

From: Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms

 

B55

S55a

S65a

S70a

G5a

G30a

U1a

Reads assigned

7,054

8,736

10,247

11,805

9,481

9,457

7,597

Status “virulence factor” b

3,791

4,552

5,531

6,187

5,174

5,130

3,817

Virulence protein

3,143

3,782

4,559

5,100

4,305

4,242

3,216

Antibiotic resistance

332

420

510

630

479

464

328

Transcription factor

188

144

181

140

215

232

133

Protein toxin

74

104

175

222

89

100

73

Differential gene regulation

54

85

106

95

86

92

66

  1. a Numbers of reads are normalized to an equal sample size (sample B55).
  2. b As defined in the MvirDB database.