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Table 8 Numbers and assignments for reads annotated as “virulence protein” based on MvirDB classifications

From: Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms

  B55 S55a G5a G30a S65a S70a U1a
Endopeptidase Clp ATP-binding chain C 100 139 162 149 162 227 124
Carbamoyl-phosphate synthase large chain 77 95 73 68 167 156 53
Chaperonin GroEL 65 102 113 91 115 139 109
Putative lysil-tRNA synthetase LysU 63 62 86 78 85 92 76
DNA mismatch repair protein 52 59 93 92 72 112 69
GTP pyrophosphokinase 49 60 41 48 75 95 49
ATP-dependent Clp protease ATP-binding subunit ClpX 46 82 78 80 102 99 61
UDP-N-acetylglucosamine 2-epimerase 43 0 0 0 0 0 24
ClpB protein 41 57 79 65 50 98 62
Pyruvate kinase 37 40 37 0 49 0 38
  1. a Numbers of reads are normalized to an equal sample size (sample B55).