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Table 8 Numbers and assignments for reads annotated as “virulence protein” based on MvirDB classifications

From: Detailed analysis of metagenome datasets obtained from biogas-producing microbial communities residing in biogas reactors does not indicate the presence of putative pathogenic microorganisms

 

B55

S55a

G5a

G30a

S65a

S70a

U1a

Endopeptidase Clp ATP-binding chain C

100

139

162

149

162

227

124

Carbamoyl-phosphate synthase large chain

77

95

73

68

167

156

53

Chaperonin GroEL

65

102

113

91

115

139

109

Putative lysil-tRNA synthetase LysU

63

62

86

78

85

92

76

DNA mismatch repair protein

52

59

93

92

72

112

69

GTP pyrophosphokinase

49

60

41

48

75

95

49

ATP-dependent Clp protease ATP-binding subunit ClpX

46

82

78

80

102

99

61

UDP-N-acetylglucosamine 2-epimerase

43

0

0

0

0

0

24

ClpB protein

41

57

79

65

50

98

62

Pyruvate kinase

37

40

37

0

49

0

38

  1. a Numbers of reads are normalized to an equal sample size (sample B55).