Table 2 Primers used in this study
Name | Sequence (5′ → 3′) |
|---|---|
HMGS-F | GGAATTCCATATG AAACTCTCAACTAAACTTTG |
HMGS-R | CACCTCGAG TTATTTTTTAACATCGTAAGATC |
tHMGR-F | CATGCCATGG ACCAATTGGTGAAAACTGAAG |
tHMGR-R | CGGGATCC TTAGGATTTAATGCAGGTGACG |
mvaS-F | CCAGAGCTC AGGAGGTAAAAAAACATGACAATTGGGATTGATAAAATTA |
mvaS-R | CAACTGCAG TTAGTTTCGATAAGAGCGAACG |
mvaE-F | CATGCCATGG AGGAGGTAAAAAAACATGAAAACAGTAGTTATTATTGATGC |
mvaE-R | CGCGGATCC TTATTGTTTTCTTAAATCATTTAAAATAG |
IDIKO-F | GTCTTTTGGATCC GTTGTTAGCTC |
IDIKO-R | CAAAACTGCAG TTATTCCTTTGGTAGACCAGTC |
phoA-F2 | CTCAGATCT CCGGACACCAGAAATGCCTGTTC |
phoA-R | CACCTCGAG TTATTTCAGCCCCAGAGCGGC |
DPP1-F2 | CTCAGATCT CCAACCGTTCGAACGTCAGTTTTAC |
DPP1-R | CACCTCGAG TTACATACCTTCATCGGACAAAG |
LPP1-F2 | CTCAGATCT CGAGATATCCCTGGTACCTAGGG |
LPP1-R | CACCTCGAG TTACTAAACACTAACCGGTGAAGGAAG |
phoE-F | CTAGCCATGG GCATGACAGCCGTTTGTTTAGTAAG |
phoE-R | CAGGGATCC TTATTTGATAAAGCCGGATAAGTG |
BsNudF-F | CTAGCCATGG GCATGAAATCATTAGAAGAAAAAAC |
BsNudF-F | CAGGGATCC TCATTTTTGTGCTTGGAGCG |
EcNudF-F | CTAGCCATGG GCATGCTTAAGCCAGACAACCTG |
EcNudF-F | CAGGGATCC TTATGCCCACTCATTTTTTAACG |
nudC-F | CTAGCCATGG ATCGTATAATTGAAAAATTAG |
nudC-R | CAGGGATCC TCACTCATACTCTGCCCGACAC |
yggV-F | CTAGCCATGG GCATGCAAAAAGTTGTCCTCGCAAC |
yggV-R | CAGGGATCC TTAACCATTACGTAAAGCGTCC |
hisl-F | CTAGCCATGG GCATGTTAACAGAACAACAACGTCG |
hisl-R | CAGGGATCC TCACTGATGCCGTTTACGCAG |
lpxH-F | CTAGCCATGG CGACACTCTTTATTGCAG |
lpxH-R | CAGGGATCC TTAAAACGGAAAATGAATCAGCTC |
ppa-F | CTAGCCATGG GCATGAGCTTACTCAACGTCCCTG |
ppa-R | CAGGGATCC TTATTTATTCTTTGCGCGCTCG |
cdh-F | CTAGCCATGG GCATGAAAAAAGCGGGTCTTCT |
cdh-R | CAGGGATCC TTAACGCAAAATCTCACACTG |
KnudF-F | TCGCTGAAATTCACATTTAATTCACTATTAGTGCCAGGACATTAACAATGCATGGGAATTAGCCATGGTCC |
KnudF-R | TCAGGAAAGTCAGGTGTGTAACGCTTCATTTATGCCCACTCATTTTTTAATGTAGGCTGGAGCTGCTTCG |
KyggV-F | GCAACAAATCCCGCCAGAAATCGCGGCGTTAATTAATTAGGTATCCTATGCATGGGAATTAGCCATGGTCC |
KyggV-R | TGTGAATGTAGAGACTCAGCGGAGGTAATTTAACCATTACGTAAAGCGTCTGTAGGCTGGAGCTGCTTCG |
KnudF-vF | ACCCAGAAAGGCTCAGGCCG |
KnudF-vR | ACAGTTTCGCCGGGTGCGTC |
KyggV-vF | GACGGCCAGGCCAACAGTCA |
KyggV-vR | CGGCCCTGAGCGTAAGCCAC |
A110G-F | CTCTTTCGAAATCAAGGAAGGTTGTTACGGAGC |
A110G-R | CCTTCCTTGATTTCGAAAGAGCGAGCGAAAG |