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Table 5 Plasmids used in this study

From: Growth and fermentation of D-xylose by Saccharomyces cerevisiae expressing a novel D-xylose isomerase originating from the bacterium Prevotella ruminicola TC2-24

Plasmid

Description

Reference

pRS414

pBluescript II SK+, TRP1, CEN6, ARSH4

[39]

pRS416

pBluescript II SK+, URA3, CEN6, ARSH4

[39]

pRS426

pBluescript II SK+, URA3, 2μ origin

[39]

pJ201

Gene synthesis vector

(DNA2.0)

pRH164

pRS414 + P HXT7 -MCS-T HXT7

[27]

pRH167

pRS426 + P HXT7 -MCS-T HXT7

[27]

pRH195

pRS414 + P HXT7 -S. cerevisiae XKS1-T HXT7

[27]

pRH218

pRS426 + P HXT7 -Piromyces sp. E2 XI-T HXT7

[40]

pRH325

pCR2.1 TOPO + Bacteroides uniformis XI

This work

pRH326

pCR2.1 TOPO + Bacteroides distasonis XI

This work

pRH327

pCR2.1 TOPO + Bacteroides ovatus XI

This work

pRH351

pRS426 + P HXT7 -Bacteroides uniformis XI-T HXT7

This work

pRH352

pRS426 + P HXT7 -Bacteroides distasonis XI-T HXT7

This work

pRH353

pRS426 + P HXT7 -Bacteroides ovatus XI-T HXT7

This work

pRH357

pCR2.1 TOPO + Prevotella ruminicola strain TC2-24 XI

This work

pRH360

pCR2.1 TOPO + Bacteroides uniformis xylB (D-xylulokinase)

This work

pRH367

pRS426 + P HXT7 -Prevotella ruminicola XI-T HXT7

This work

pRH369

pRS426 + P HXT7 -Bacteroides uniformis xylB-T HXT7

This work

pRH379

pJ201 + Prevotella ruminicola TC2-24 codon-adapted XI

This work

pRH380

pJ201 + Prevotella ruminicola 23 codon-adapted XK

This work

pRH384

pRS426 + P HXT7 -P. ruminicola TC2-24 codon-adapted XI -T HXT7

This work

pRH385

pRS414 + P HXT7 -P. ruminicola 23 codon-adapted XK -T HXT7

This work

pRH544

pRS414 + P HXT7 -P. ruminicola 23 codon-adapted XK -T HXT7 rescued from YRH1114

This work

pRH545

pRS426 + P HXT7 -P ruminicola TC2-24 codon-adapted XI -T HXT7 rescued from YRH1114

This work

  1. For all plasmids listed using the HXT7 promoter, P HXT7 is the truncated version of the HXT7 promoter for constitutive expression.