Table 2 Genomics, transcriptome or gene expression in different Z. mobilis strains

ZM4 (ATCC31821)

NC_006526.2

2.06

5

1,738

[9]

NCIMB11163

NC_013355.1

2.22

3

1,884

[36]

ATCC 29191

NC_018145.1

2.01

3

1,709

[37]

ATCC 29192

NC_015709.1

2.06

2

1,748

[38]

ATCC 10988

NC_017262.1

2.14

6

1,803

[39]

ZM401 (ATCC 31822)

Draft genome sequence

2.04

Not found

1,910

[40]

CP4 (NRRL B-14023)

NC_022900.1

2.16

5

1,840

[41]

(CP006818.1)

Transcriptome or gene expression

ZM4 (ATCC31821)

GSE10302

Transcriptomic profiling of ZM4 during aerobic and anaerobic fermentations

[42]

GSE37848

Expression profiling of ZM4 in response to furfural stress

[43]

GSE39558

Transcriptomic profiling of ZM4 in response to ethanol stress

[44]

GSE21165

Systems biology analysis of ZM4 ethanol stress responses

[45]

GSE39466

Comparison of gene expression and mutant fitness in ZM4

Lawrence Berkeley Laboratory, unpublished data

GSE51870

Expression data for ZM4 growing in rich and minimal media, heat-shocked, or at high ethanol

Lawrence Berkeley Laboratory, unpublished data

ZM4 (AcR)

GSE18106

Genome changes associated with Z. mobilis sodium acetate-tolerant mutant (AcR)

[29]

RDM-4 strain of Z. mobilis

GSE22355

Expression analysis of a respiration-deficient mutant of Z. mobilis ZM6

Faculty of Food and Nutrition, Beppu university

ZM401

Not deposited

Genome-wide transcriptomic analysis of a flocculent strain of Z. mobilis ZM401

[46]

ZM4 (ATCC31821)

GSE49620

Transcriptional responses of Z. mobilis to osmotic shock of high glucose concentration

Unpublished data, performed by Sichuan University and Biogas Institute of Ministry of Agriculture