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Table 1 Structural homology of lytic polysaccharide monooxygenases

From: Evolution of substrate specificity in bacterial AA10 lytic polysaccharide monooxygenases

PDB ID

% RMSD1

%id

Source structure

CAZy family

Source organism

Active site residues

2BEM

0

100

X-ray

AA10

Serratia marcescens

H28-H114-F187

2XWX

0.8

51

X-ray

AA10

Vibrio cholerae

H24-H121-F193

4A02

1

52

X-ray

AA10

Enterococcus faecalis

H29-H114-F185

2LHS

1.4

100

NMR

AA10

Serratia marcescens

H28-H114-F187

3UAM

1.4

39

X-ray

AA10

Burkholderia pseudomallei

H19-H122-F205

2VTC

3.2

9

X-ray

AA9

Hypocrea jecorina

H1-H89-Y176

4EIR

2.8

9

X-ray

AA9

Neurospora crassa

H1-H84-Y168

3ZUD

3.3

12

X-ray

AA9

Thermoascus aurantiacus

H1-H86-Y175

3EII

3.2

11

X-ray

AA9

Thielavia terrestris

H1-H68-Y153

4EIS

2.8

7

X-ray

AA9

Neurospora crassa

H1-H82-Y171

  1. 1Root mean square deviation (RMSD) (%) for each structure from Protein Data Bank (pdb) compared to 2BEM determined by X-ray crystallography; %id indicates the percentage identity of each sequence to that of 2BEM. Three active site residues, His, His, and Phe/Tyr, are shown with residue numbers.