Skip to main content

Table 2 The expression of predicted sugar transporter genes in the genome of Neurospora crassa on D-glucose, L-arabinose or D-xylose

From: Transcriptional comparison of the filamentous fungus Neurospora crassagrowing on three major monosaccharides D-glucose, D-xylose and L-arabinose

Locus

Annotation

Reads per kilobase of exon model per million mapped reads (RPKM)

D-glucose

L-arabinose

D-xylose

NCU01633

Hexose transporter HXT13

242.45

9.92

29.68

NCU02188

Sugar transporter

1.20

1200.18

4.43

NCU08114

Hexose transporter

1.24

587.22

138.64

NCU09287

Sugar transporter

1.55

560.93

30.21

NCU00821

Sugar transporter

32.87

414.86

57.54

NCU10021

MFS monosaccharide transporter

6.61

394.47

1045.02

NCU00809

MFS monosaccharide transporter

7.07

314.73

6.64

NCU01132

MFS monosaccharide transporter

0.46

280.94

0.87

NCU06138

Quinate permease

0.74

213.95

75.43

NCU05897

L-fucose permease

1.10

179.47

315.45

NCU05853

MFS sugar transporter

2.36

149.95

5.65

NCU04963

High-affinity glucose transporter

4.91

128.69

402.90

NCU04537

Monosaccharide transporter

1.06

3.35

410.00

NCU05627

High affinity glucose transporter ght1

4.47

48.96

244.36

NCU00450

Sucrose transporter

28.78

52.91

23.15

NCU00801

MFS lactose permease

6.10

25.15

24.96

NCU00988

MFS quinate transporter

0.18

47.98

0.86

NCU01494

MFS sugar transporter

1.34

6.47

2.07

NCU01813

High affinity glucose transporter

23.68

38.96

16.02

NCU01868

MFS maltose permease malp

0.41

2.42

0.54

NCU02582

Rco3

9.65

42.90

12.30

NCU04310

Sugar transporter

9.68

26.59

12.88

NCU05350

Sugar transporter

0.37

10.25

0.55

NCU05585

MFS quinate transporter

1.01

47.89

1.52

NCU06026

Quinate permease

5.99

37.83

13.25

NCU06358

High affinity glucose transporter RGT2

1.71

51.82

18.50

NCU06384

MFS sugar transporter

0.08

2.88

1.11

NCU06522

MFS maltose permease

1.35

3.39

1.98

NCU07054

Sugar transporter 4

0.03

0.41

0.14

NCU07169

MFS glucose transporter

13.55

30.96

13.49

NCU07607

Sugar transporter

2.53

10.65

23.97

NCU07861

Maltose transporter

0.54

1.05

0.67

NCU08152

High affinity glucose transporter

0.05

0.71

0.09

NCU08180

High-affinity glucose transporter

0.00

0.01

0.00

NCU08858

MFS alpha-glucoside transporter

24.76

36.86

37.86

NCU09321

Sucrose transporter

33.00

37.66

35.30

NCU09358

Hexose carrier protein

0.27

15.90

0.77

NCU11342

MFS hexose transporter

0.15

1.51

0.63

NCU12154

Maltose permease MAL61

2.10

2.59

1.51

  1. The genes with RPKM values more than 100 are shown as bold font.