Skip to main content

Advertisement

Table 2 The expression of predicted sugar transporter genes in the genome of Neurospora crassa on D-glucose, L-arabinose or D-xylose

From: Transcriptional comparison of the filamentous fungus Neurospora crassagrowing on three major monosaccharides D-glucose, D-xylose and L-arabinose

Locus Annotation Reads per kilobase of exon model per million mapped reads (RPKM)
D-glucose L-arabinose D-xylose
NCU01633 Hexose transporter HXT13 242.45 9.92 29.68
NCU02188 Sugar transporter 1.20 1200.18 4.43
NCU08114 Hexose transporter 1.24 587.22 138.64
NCU09287 Sugar transporter 1.55 560.93 30.21
NCU00821 Sugar transporter 32.87 414.86 57.54
NCU10021 MFS monosaccharide transporter 6.61 394.47 1045.02
NCU00809 MFS monosaccharide transporter 7.07 314.73 6.64
NCU01132 MFS monosaccharide transporter 0.46 280.94 0.87
NCU06138 Quinate permease 0.74 213.95 75.43
NCU05897 L-fucose permease 1.10 179.47 315.45
NCU05853 MFS sugar transporter 2.36 149.95 5.65
NCU04963 High-affinity glucose transporter 4.91 128.69 402.90
NCU04537 Monosaccharide transporter 1.06 3.35 410.00
NCU05627 High affinity glucose transporter ght1 4.47 48.96 244.36
NCU00450 Sucrose transporter 28.78 52.91 23.15
NCU00801 MFS lactose permease 6.10 25.15 24.96
NCU00988 MFS quinate transporter 0.18 47.98 0.86
NCU01494 MFS sugar transporter 1.34 6.47 2.07
NCU01813 High affinity glucose transporter 23.68 38.96 16.02
NCU01868 MFS maltose permease malp 0.41 2.42 0.54
NCU02582 Rco3 9.65 42.90 12.30
NCU04310 Sugar transporter 9.68 26.59 12.88
NCU05350 Sugar transporter 0.37 10.25 0.55
NCU05585 MFS quinate transporter 1.01 47.89 1.52
NCU06026 Quinate permease 5.99 37.83 13.25
NCU06358 High affinity glucose transporter RGT2 1.71 51.82 18.50
NCU06384 MFS sugar transporter 0.08 2.88 1.11
NCU06522 MFS maltose permease 1.35 3.39 1.98
NCU07054 Sugar transporter 4 0.03 0.41 0.14
NCU07169 MFS glucose transporter 13.55 30.96 13.49
NCU07607 Sugar transporter 2.53 10.65 23.97
NCU07861 Maltose transporter 0.54 1.05 0.67
NCU08152 High affinity glucose transporter 0.05 0.71 0.09
NCU08180 High-affinity glucose transporter 0.00 0.01 0.00
NCU08858 MFS alpha-glucoside transporter 24.76 36.86 37.86
NCU09321 Sucrose transporter 33.00 37.66 35.30
NCU09358 Hexose carrier protein 0.27 15.90 0.77
NCU11342 MFS hexose transporter 0.15 1.51 0.63
NCU12154 Maltose permease MAL61 2.10 2.59 1.51
  1. The genes with RPKM values more than 100 are shown as bold font.