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Table 2 Assembly statistics for strain DSM 10061

From: Comparison of single-molecule sequencing and hybrid approaches for finishing the genome of Clostridium autoethanogenum and analysis of CRISPR systems in industrial relevant Clostridia

  Contigs (number) Largest contig (bp) Contig N50 (bp) Genome size (Mb) Scaffolds Largest scaffold (bp) Scaffold N50 (bp) Assembler
454/Ion Torrent * 100 436,795 115,901 4.32     Newbler 2.6
Illumina only 57 460,940 255,482 4.3 53 769,812 328,660 Velvet 1.2
454 only 32 134,546 330,116 4.3 13 1,137,876 898,466 Newbler 2.8
Illumina/ 454 Hybrid 22 1,137,625 687,076 4.3 13 1,137,625 899,926 Newbler 2.8
PacBio 1 4,352,205 4,352,267 4.3 1 4,352,267 4,352,267 SMRT 2.0
  1. *Previously published as a 4.5-Mb draft genome [26], but present [GenBank: ASZX00000000.1] as 4,323,309 bp.