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Table 1 Log 2 fold change (FC) of the top 10 genes differentially expressed in cellulose, glucose and sophorose

From: Comparative metabolism of cellulose, sophorose and glucose in Trichoderma reeseiusing high-throughput genomic and proteomic analyses

Condition

Protein ID

Name

GO term

FC Cel/Glu

FC Sph/Cel

FC Sph/Glu

Cellulose

69957

MFS permease

Cellular component

11.001

-3.673

0

56996

GH5 β-Mannanase MAN1

Biological process

10.849

-5.403

0

69944

GH31 α-xylosidase/α-glucosidase

Biological process

10.500

-2.007

0

73632

CE5 acetyl xylan esterase AXE1

Molecular function

8.060

-1.025

0

108642

Unknown protein

Unknown

3.644

-8.621

0

112258

Unknown protein

Unknown

4.665

-8.069

0

124079

Multicopper oxidases

Molecular function

3.787

-7.762

0

123236

SSCRP

Unknown

2.666

-7.713

0

119552

Unique protein

Unknown

3.884

-7.090

0

55886

GH16 glucan endo-1,3(4)-β-D-glucosidase

Unknown

4.086

-7.067

0

Glucose

79816

Unknown protein; secreted

Molecular function

-5.793

0

-9.354

70520

short chain dehydrogenase/reductase

Molecular function

-4.333

0

-9.263

23382

Aldehyde reductase AKR7

Molecular function

-4.028

0

-9.213

30759

Zinc-containing alcohol dehydrogenase superfamily

Molecular function

-3.684

0

-8.508

123084

Chloroperoxidase

Molecular function

-4.587

0

-8.369

122998

Unknown protein

Unknown

-3.640

0

-7.637

69115

Dienelactone hydrolase

Unknown

-4.827

0

-7.496

81525

Isoflavone reductase

Molecular function

-4.430

0

-7.448

81586

Unknown protein

Unknown

-2.903

0

-7.338

76641

MFS permease

Cellular component

-4.454

0

-7.309

Sophorose

106164

short chain dehydrogenase/reductase

Molecular function

0

2.026

10.007

59628

Unknown protein

Unknown

0

3.846

5.711

48444

MFS maltose permease

Cellular component

0

2.109

5.524

5345

FAD-containing oxidoreductase

Molecular function

0

2.579

5.443

122087

Unknown protein

Cellular component

0

2.898

5.225

21876

Zinc-binding oxidoreductase

Molecular function

0

5.034

3.828

22915

Glucose oxidase

Molecular function

0

1.156

4.544

110267

Unknown protein

Biological process

0

4.486

1.287

60945

MFS permease

Cellular component

0

1.341

4.451

55802

GH76 α-1,6-mannanase

Molecular function

0

1.956

4.441

  1. GO, Gene Ontology; MFS, Major facilitator superfamily; GH, glycoside hyrolase; CE, carbohydrate esterase; AXE, acetyl xylan esterase; SSCRP, Small secreted cysteine-rich protein; Cel, cellulose; Glu, glucose; Sph, sophorose.