TY - JOUR AU - Chundawat, S. P. S. AU - Beckham, G. T. AU - Himmel, M. E. AU - Dale, B. E. PY - 2011 DA - 2011// TI - Deconstruction of lignocellulosic biomass to fuels and chemicals JO - Annu Rev Chem Biomol Eng VL - 2 UR - https://doi.org/10.1146/annurev-chembioeng-061010-114205 DO - 10.1146/annurev-chembioeng-061010-114205 ID - Chundawat2011 ER - TY - JOUR AU - Hahn-Hägerdal, B. AU - Galbe, M. AU - Gorwa-Grauslund, M. F. AU - Lidén, G. AU - Zacchi, G. PY - 2006 DA - 2006// TI - Bio-ethanol: the fuel of tomorrow from the residues of today JO - Trends Biotechnol VL - 24 UR - https://doi.org/10.1016/j.tibtech.2006.10.004 DO - 10.1016/j.tibtech.2006.10.004 ID - Hahn-Hägerdal2006 ER - TY - JOUR AU - Talebnia, F. AU - Karakashev, D. AU - Angelidaki, I. PY - 2010 DA - 2010// TI - Production of bioethanol from wheat straw: an overview on pretreatment, hydrolysis and fermentation JO - Bioresour Technol VL - 101 UR - https://doi.org/10.1016/j.biortech.2009.11.080 DO - 10.1016/j.biortech.2009.11.080 ID - Talebnia2010 ER - TY - JOUR AU - Palmqvist, E. AU - Hahn-Hägerdal, B. PY - 2000 DA - 2000// TI - Fermentation of lignocellulosic hydrolysates, II: inhibitors and mechanisms of inhibition JO - Bioresour Technol VL - 1 UR - https://doi.org/10.1016/S0960-8524(99)00161-3 DO - 10.1016/S0960-8524(99)00161-3 ID - Palmqvist2000 ER - TY - JOUR AU - van Maris, A. AU - Abbott, D. AU - Bellissimi, E. AU - van den Brink, J. AU - Kuyper, M. AU - Luttik, M. AU - Wisselink, H. AU - Scheffers, W. AU - van Dijken, J. AU - Pronk, J. PY - 2006 DA - 2006// TI - Alcoholic fermentation of carbon sources in biomass hydrolyzates by Saccharomyces cerevisiae: current status JO - Antonie Van Leeuwenhoek VL - 90 UR - https://doi.org/10.1007/s10482-006-9085-7 DO - 10.1007/s10482-006-9085-7 ID - van Maris2006 ER - TY - JOUR AU - Hahn-Hägerdal, B. AU - Karhumaa, K. AU - Fonseca, C. AU - Spencer-Martins, I. AU - Gorwa-Grauslund, M. PY - 2007 DA - 2007// TI - Towards industrial pentose-fermenting yeast strains JO - Appl Microbiol Biotechnol VL - 74 UR - https://doi.org/10.1007/s00253-006-0827-2 DO - 10.1007/s00253-006-0827-2 ID - Hahn-Hägerdal2007 ER - TY - JOUR AU - Matsushika, A. AU - Inoue, H. AU - Kodaki, T. AU - Sawayama, S. PY - 2009 DA - 2009// TI - Ethanol production from xylose in engineered Saccharomyces cerevisiae strains: current state and perspectives JO - Appl Microbiol Biotechnol VL - 84 UR - https://doi.org/10.1007/s00253-009-2101-x DO - 10.1007/s00253-009-2101-x ID - Matsushika2009 ER - TY - JOUR AU - Sims, R. E. H. AU - Mabee, W. AU - Saddler, J. N. AU - Taylor, M. PY - 2010 DA - 2010// TI - An overview of second generation biofuel technologies JO - Bioresour Technol VL - 101 UR - https://doi.org/10.1016/j.biortech.2009.11.046 DO - 10.1016/j.biortech.2009.11.046 ID - Sims2010 ER - TY - JOUR AU - Brat, D. AU - Boles, E. AU - Wiedemann, B. PY - 2009 DA - 2009// TI - Functional expression of a bacterial xylose isomerase in Saccharomyces cerevisiae JO - Appl Environ Microbiol VL - 75 UR - https://doi.org/10.1128/AEM.02522-08 DO - 10.1128/AEM.02522-08 ID - Brat2009 ER - TY - JOUR AU - Ho, N. W. AU - Chen, Z. AU - Brainard, A. P. PY - 1998 DA - 1998// TI - Genetically engineered Saccharomyces yeast capable of effective cofermentation of glucose and xylose JO - Appl Environ Microbiol VL - 64 ID - Ho1998 ER - TY - JOUR AU - Karhumaa, K. AU - Garcia Sanchez, R. AU - Hahn-Hägerdal, B. AU - Gorwa-Grauslund, M. PY - 2007 DA - 2007// TI - Comparison of the xylose reductase-xylitol dehydrogenase and the xylose isomerase pathways for xylose fermentation by recombinant Saccharomyces cerevisiae JO - Microb Cell Fact VL - 6 UR - https://doi.org/10.1186/1475-2859-6-5 DO - 10.1186/1475-2859-6-5 ID - Karhumaa2007 ER - TY - JOUR AU - Kotter, P. AU - Amore, R. AU - Hollenberg, C. P. AU - Ciriacy, M. PY - 1990 DA - 1990// TI - Isolation and characterization of the Pichia stipitis xylitol dehydrogenase gene, XYL2, and construction of a xylose-utilizing Saccharomyces cerevisia e transformant JO - Curr Genet VL - 18 UR - https://doi.org/10.1007/BF00327019 DO - 10.1007/BF00327019 ID - Kotter1990 ER - TY - JOUR AU - van Maris, A. AU - Winkler, A. AU - Kuyper, M. AU - de Laat, W. AU - van Dijken, J. AU - Pronk, J. PY - 2007 DA - 2007// TI - Development of efficient xylose fermentation in Saccharomyces cerevisiae: xylose isomerase as a key component JO - Adv Biochem Eng Biotechnol VL - 108 ID - van Maris2007 ER - TY - JOUR AU - Viikari, L. AU - Vehmaanperä, J. AU - Koivula, A. PY - 2012 DA - 2012// TI - Lignocellulosic ethanol: from science to industry JO - Biomass Bioenergy VL - 46 UR - https://doi.org/10.1016/j.biombioe.2012.05.008 DO - 10.1016/j.biombioe.2012.05.008 ID - Viikari2012 ER - TY - JOUR AU - Jeppsson, M. AU - Bengtsson, O. AU - Franke, K. AU - Lee, H. AU - Hahn-Hägerdal, B. AU - Gorwa-Grauslund, M. F. PY - 2006 DA - 2006// TI - The expression of a Pichia stipitis xylose reductase mutant with higher K (M) for NADPH increases ethanol production from xylose in recombinant Saccharomyces cerevisiae JO - Biotechnol Bioeng VL - 93 UR - https://doi.org/10.1002/bit.20737 DO - 10.1002/bit.20737 ID - Jeppsson2006 ER - TY - JOUR AU - Petschacher, B. AU - Nidetzky, B. PY - 2005 DA - 2005// TI - Engineering Candida tenuis xylose reductase for improved utilization of NADH: Antagonistic effects of multiple side chain replacements and performance of site-directed mutants under simulated in vivo conditions JO - Appl Environ Microbiol VL - 71 UR - https://doi.org/10.1128/AEM.71.10.6390-6393.2005 DO - 10.1128/AEM.71.10.6390-6393.2005 ID - Petschacher2005 ER - TY - JOUR AU - Matsushika, A. AU - Watanabe, S. AU - Kodaki, T. AU - Makino, K. AU - Inoue, H. AU - Murakami, K. AU - Takimura, O. AU - Sawayama, S. PY - 2008 DA - 2008// TI - Expression of protein engineered NADP + -dependent xylitol dehydrogenase increases ethanol production from xylose in recombinant Saccharomyces cerevisiae JO - Appl Microbiol Biotechnol VL - 81 UR - https://doi.org/10.1007/s00253-008-1649-1 DO - 10.1007/s00253-008-1649-1 ID - Matsushika2008 ER - TY - JOUR AU - Krahulec, S. AU - Klimacek, M. AU - Nidetzky, B. PY - 2012 DA - 2012// TI - Analysis and prediction of the physiological effects of altered coenzyme specificity in xylose reductase and xylitol dehydrogenase during xylose fermentation by Saccharomyces cerevisiae JO - J Biotechnol VL - 158 UR - https://doi.org/10.1016/j.jbiotec.2011.08.026 DO - 10.1016/j.jbiotec.2011.08.026 ID - Krahulec2012 ER - TY - JOUR AU - Krahulec, S. AU - Longus, K. AU - Klimacek, M. AU - Nidetzky, B. PY - 2010 DA - 2010// TI - On the role of a balanced cofactor recycling between xylose reductase and xylitol dehydrogenase in recombinant xylose fermenting strains of Saccharomyces cerevisiae JO - J Biotechnol VL - 150 UR - https://doi.org/10.1016/j.jbiotec.2010.08.046 DO - 10.1016/j.jbiotec.2010.08.046 ID - Krahulec2010 ER - TY - JOUR AU - Petschacher, B. AU - Nidetzky, B. PY - 2008 DA - 2008// TI - Altering the coenzyme preference of xylose reductase to favor utilization of NADH enhances ethanol yield from xylose in a metabolically engineered strain of Saccharomyces cerevisiae JO - Microb Cell Fact VL - 7 UR - https://doi.org/10.1186/1475-2859-7-9 DO - 10.1186/1475-2859-7-9 ID - Petschacher2008 ER - TY - JOUR AU - Krahulec, S. AU - Klimacek, M. AU - Nidetzky, B. PY - 2009 DA - 2009// TI - Engineering of a matched pair of xylose reductase and xylitol dehydrogenase for xylose fermentation by Saccharomyces cerevisiae JO - Biotechnol J VL - 4 UR - https://doi.org/10.1002/biot.200800334 DO - 10.1002/biot.200800334 ID - Krahulec2009 ER - TY - JOUR AU - Krahulec, S. AU - Petschacher, B. AU - Wallner, M. AU - Longus, K. AU - Klimacek, M. AU - Nidetzky, B. PY - 2010 DA - 2010// TI - Fermentation of mixed glucose-xylose substrates by engineered strains of Saccharomyces cerevisiae: role of the coenzyme specificity of xylose reductase, and effect of glucose on xylose utilization JO - Microb Cell Fact VL - 9 UR - https://doi.org/10.1186/1475-2859-9-16 DO - 10.1186/1475-2859-9-16 ID - Krahulec2010 ER - TY - JOUR AU - Demeke, M. AU - Dietz, H. AU - Li, Y. AU - Foulquie-Moreno, M. AU - Mutturi, S. AU - Deprez, S. AU - Den Abt, T. AU - Bonini, B. AU - Liden, G. AU - Dumortier, F. AU - Verplaetse, A. AU - Boles, E. AU - Thevelein, J. M. PY - 2013 DA - 2013// TI - Development of a D-xylose fermenting and inhibitor tolerant industrial Saccharomyces cerevisiae strain with high performance in lignocellulose hydrolyzates using metabolic and evolutionary engineering JO - Biotechnol Biofuels VL - 6 UR - https://doi.org/10.1186/1754-6834-6-89 DO - 10.1186/1754-6834-6-89 ID - Demeke2013 ER - TY - JOUR AU - Koppram, R. AU - Albers, E. AU - Olsson, L. PY - 2012 DA - 2012// TI - Evolutionary engineering strategies to enhance tolerance of xylose utilizing recombinant yeast to inhibitors derived from spruce biomass JO - Biotechnol Biofuels VL - 5 UR - https://doi.org/10.1186/1754-6834-5-32 DO - 10.1186/1754-6834-5-32 ID - Koppram2012 ER - TY - CHAP AU - Sauer, U. ED - Nielsen, J. ED - Eggeling, L. ED - Dynesen, J. ED - Gárdonyi, M. ED - Gill, R. ED - de Graaf, A. ED - Hahn-Hägerdal, B. ED - Jönsson, L. ED - Khosla, C. ED - Licari, R. PY - 2001 DA - 2001// TI - Evolutionary engineering of industrially important microbial phenotypes BT - Metabolic Engineering PB - Springer Berlin CY - Heidelberg UR - https://doi.org/10.1007/3-540-45300-8_7 DO - 10.1007/3-540-45300-8_7 ID - Sauer2001 ER - TY - JOUR AU - Sonderegger, M. AU - Sauer, U. PY - 2003 DA - 2003// TI - Evolutionary engineering of Saccharomyces cerevisiae for anaerobic growth on xylose JO - Appl Environ Microbiol VL - 69 UR - https://doi.org/10.1128/AEM.69.4.1990-1998.2003 DO - 10.1128/AEM.69.4.1990-1998.2003 ID - Sonderegger2003 ER - TY - JOUR AU - Ha, S. J. AU - Galazka, J. M. AU - Kim, S. R. AU - Choi, J. H. AU - Yang, X. AU - Seo, J. H. AU - Glass, N. L. AU - Cate, J. H. AU - Jin, Y. S. PY - 2011 DA - 2011// TI - Engineered Saccharomyces cerevisiae capable of simultaneous cellobiose and xylose fermentation JO - Proc Natl Acad Sci USA VL - 108 UR - https://doi.org/10.1073/pnas.1010456108 DO - 10.1073/pnas.1010456108 ID - Ha2011 ER - TY - JOUR AU - Kuyper, M. AU - Toirkens, M. J. AU - Diderich, J. A. AU - Winkler, A. A. AU - van Dijken, J. P. AU - Pronk, J. T. PY - 2005 DA - 2005// TI - Evolutionary engineering of mixed-sugar utilization by a xylose-fermenting Saccharomyces cerevisiae strain JO - FEMS Yeast Res VL - 5 UR - https://doi.org/10.1016/j.femsyr.2005.04.004 DO - 10.1016/j.femsyr.2005.04.004 ID - Kuyper2005 ER - TY - JOUR AU - Almeida, J. R. M. AU - Karhumaa, K. AU - Bengtsson, O. AU - Gorwa-Grauslund, M. -. F. PY - 2009 DA - 2009// TI - Screening of Saccharomyces cerevisiae strains with respect to anaerobic growth in non-detoxified lignocellulose hydrolyzate JO - Bioresour Technol VL - 100 UR - https://doi.org/10.1016/j.biortech.2009.02.057 DO - 10.1016/j.biortech.2009.02.057 ID - Almeida2009 ER - TY - JOUR AU - Kim, S. AU - Dale, B. PY - 2004 DA - 2004// TI - Global potential bioethanol production from wasted crops and crop residues JO - Biomass Bioenergy VL - 4 UR - https://doi.org/10.1016/j.biombioe.2003.08.002 DO - 10.1016/j.biombioe.2003.08.002 ID - Kim2004 ER - TY - JOUR AU - Erdei, B. AU - Barta, Z. AU - Sipos, B. AU - Reczey, K. AU - Galbe, M. AU - Zacchi, G. PY - 2010 DA - 2010// TI - Ethanol production from mixtures of wheat straw and wheat meal JO - Biotechnol Biofuels VL - 3 UR - https://doi.org/10.1186/1754-6834-3-16 DO - 10.1186/1754-6834-3-16 ID - Erdei2010 ER - TY - JOUR AU - Olofsson, K. AU - Palmqvist, B. AU - Liden, G. PY - 2010 DA - 2010// TI - Improving simultaneous saccharification and co-fermentation of pretreated wheat straw using both enzyme and substrate feeding JO - Biotechnol Biofuels VL - 3 ID - Olofsson2010 ER - TY - JOUR AU - Erdei, B. AU - Franko, B. AU - Galbe, M. AU - Zacchi, G. PY - 2012 DA - 2012// TI - Separate hydrolysis and co-fermentation for improved xylose utilization in integrated ethanol production from wheat meal and wheat straw JO - Biotechnol Biofuels VL - 5 UR - https://doi.org/10.1186/1754-6834-5-12 DO - 10.1186/1754-6834-5-12 ID - Erdei2012 ER - TY - JOUR AU - Erdei, B. AU - Frankó, B. AU - Galbe, M. AU - Zacchi, G. PY - 2013 DA - 2013// TI - Glucose and xylose co-fermentation of pretreated wheat straw using mutants of S. cerevisiae TMB3400 JO - J Biotechnol VL - 164 UR - https://doi.org/10.1016/j.jbiotec.2012.12.003 DO - 10.1016/j.jbiotec.2012.12.003 ID - Erdei2013 ER - TY - JOUR AU - Tomas-Pejo, E. AU - Oliva, J. AU - Ballesteros, M. AU - Olsson, L. PY - 2008 DA - 2008// TI - Comparison of SHF and SSF processes from steam-exploded wheat straw for ethanol production by xylose-fermenting and robust glucose-fermenting Saccharomyces cerevisiae strains JO - Biotechnol Bioeng VL - 6 UR - https://doi.org/10.1002/bit.21849 DO - 10.1002/bit.21849 ID - Tomas-Pejo2008 ER - TY - JOUR AU - Ballesteros, I. AU - Negro, M. J. AU - Oliva, J. M. AU - Cabanas, A. AU - Manzanares, P. AU - Ballesteros, M. PY - 2006 DA - 2006// TI - Ethanol production from steam-explosion pretreated wheat straw JO - Appl Biochem Biotechnol VL - 129–132 UR - https://doi.org/10.1385/ABAB:130:1:496 DO - 10.1385/ABAB:130:1:496 ID - Ballesteros2006 ER - TY - JOUR AU - Kadam, K. L. AU - Newman, M. M. PY - 1997 DA - 1997// TI - Development of a low-cost fermentation medium for ethanol production from biomass JO - Appl Microbiol Biotechnol VL - 47 UR - https://doi.org/10.1007/s002530050985 DO - 10.1007/s002530050985 ID - Kadam1997 ER - TY - JOUR AU - Jorgensen, H. PY - 2009 DA - 2009// TI - Effect of nutrients on fermentation of pretreated wheat straw at very high dry matter content by Saccharomyces cerevisiae JO - Appl Biochem Biotechnol VL - 153 UR - https://doi.org/10.1007/s12010-008-8456-0 DO - 10.1007/s12010-008-8456-0 ID - Jorgensen2009 ER - TY - JOUR AU - Zhou, H. AU - Cheng, J. S. AU - Wang, B. L. AU - Fink, G. R. AU - Stephanopoulos, G. PY - 2012 DA - 2012// TI - Xylose isomerase overexpression along with engineering of the pentose phosphate pathway and evolutionary engineering enable rapid xylose utilization and ethanol production by Saccharomyces cerevisiae JO - Metab Eng VL - 14 UR - https://doi.org/10.1016/j.ymben.2012.07.011 DO - 10.1016/j.ymben.2012.07.011 ID - Zhou2012 ER - TY - JOUR AU - Novy, V. AU - Krahulec, S. AU - Longus, K. AU - Klimacek, M. AU - Nidetzky, B. PY - 2013 DA - 2013// TI - Co-fermentation of hexose and pentose sugars in a spent sulfite liquor matrix with genetically modified Saccharomyces cerevisiae JO - Bioresour Technol VL - 130 UR - https://doi.org/10.1016/j.biortech.2012.11.115 DO - 10.1016/j.biortech.2012.11.115 ID - Novy2013 ER - TY - JOUR AU - Casey, E. AU - Sedlak, M. AU - Ho, N. W. AU - Mosier, N. S. PY - 2010 DA - 2010// TI - Effect of acetic acid and pH on the co-fermentation of glucose and xylose to ethanol by a genetically engineered strain of Saccharomyces cerevisiae JO - FEMS Yeast Res VL - 10 UR - https://doi.org/10.1111/j.1567-1364.2010.00623.x DO - 10.1111/j.1567-1364.2010.00623.x ID - Casey2010 ER - TY - JOUR AU - Meinander, N. Q. AU - Boels, I. AU - Hahn-Hägerdal, B. PY - 1999 DA - 1999// TI - Fermentation of xylose/glucose mixtures by metabolically engineered Saccharomyces cerevisiae strains expressing XYL1 and XYL2 from Pichia stipitis with and without overexpression of TAL1 JO - Bioresour Technol VL - 68 UR - https://doi.org/10.1016/S0960-8524(98)00085-6 DO - 10.1016/S0960-8524(98)00085-6 ID - Meinander1999 ER - TY - JOUR AU - Olofsson, K. AU - Rudolf, A. AU - Liden, G. PY - 2008 DA - 2008// TI - Designing simultaneous saccharification and fermentation for improved xylose conversion by a recombinant strain of Saccharomyces cerevisiae JO - J Biotechnol VL - 134 UR - https://doi.org/10.1016/j.jbiotec.2008.01.004 DO - 10.1016/j.jbiotec.2008.01.004 ID - Olofsson2008 ER - TY - CHAP AU - Sluiter, A. AU - Hames, B. AU - Ruiz, R. AU - Scarlata, C. AU - Sluiter, J. AU - Templeton, D. AU - Crocker, D. PY - 2011 DA - 2011// TI - Technical Report NREL/TP-510-42618 BT - Determination of Structural Carbohydrates and Lignin in Biomass PB - National Renewable Energy Laboratory CY - Golden, CO ID - Sluiter2011 ER - TY - JOUR AU - Esterbauer, H. AU - Steiner, W. AU - Labudova, I. AU - Hermann, A. AU - Hayn, M. PY - 1991 DA - 1991// TI - Production of Trichoderma cellulase in laboratory and pilot scale JO - Bioresour Technol VL - 36 UR - https://doi.org/10.1016/0960-8524(91)90099-6 DO - 10.1016/0960-8524(91)90099-6 ID - Esterbauer1991 ER - TY - JOUR AU - Ghose, T. PY - 1987 DA - 1987// TI - Measurement of cellulase activities JO - Pure Appl Chem VL - 2 ID - Ghose1987 ER - TY - JOUR AU - Lange, H. C. AU - Heijnen, J. J. PY - 2001 DA - 2001// TI - Statistical reconciliation of the elemental and molecular biomass composition of Saccharomyces cerevisiae JO - Biotechnol Bioeng VL - 75 UR - https://doi.org/10.1002/bit.10054 DO - 10.1002/bit.10054 ID - Lange2001 ER - TY - JOUR AU - Klimacek, M. AU - Krahulec, S. AU - Sauer, U. AU - Nidetzky, B. PY - 2010 DA - 2010// TI - Limitations in xylose-fermenting Saccharomyces cerevisiae, made evident through comprehensive metabolite profiling and thermodynamic analysis JO - Appl Environ Microbiol VL - 76 UR - https://doi.org/10.1128/AEM.01787-10 DO - 10.1128/AEM.01787-10 ID - Klimacek2010 ER -