TY - JOUR AU - Hasunuma, T. AU - Kondo, A. PY - 2012 DA - 2012// TI - Development of yeast cell factories for consolidated bioprocessing of lignocellulose to bioethanol through cell surface engineering JO - Biotechnol Adv VL - 30 UR - https://doi.org/10.1016/j.biotechadv.2011.10.011 DO - 10.1016/j.biotechadv.2011.10.011 ID - Hasunuma2012 ER - TY - JOUR AU - Alvira, P. AU - Tomás-Pejó, E. AU - Ballesteros, M. AU - Negro, M. J. PY - 2010 DA - 2010// TI - Pretreatment technologies for an efficient bioethanol production process based on enzymatic hydrolysis: a review JO - Bioresour Technol VL - 101 UR - https://doi.org/10.1016/j.biortech.2009.11.093 DO - 10.1016/j.biortech.2009.11.093 ID - Alvira2010 ER - TY - JOUR AU - da Costa Sousa, L. AU - Chundawat, S. P. AU - Balan, V. AU - Dale, B. E. PY - 2009 DA - 2009// TI - ‘Cradle-to-grave’ assessment of existing lignocellulose pretreatment technologies JO - Curr Opin Biotechnol VL - 20 UR - https://doi.org/10.1016/j.copbio.2009.05.003 DO - 10.1016/j.copbio.2009.05.003 ID - da Costa Sousa2009 ER - TY - JOUR AU - Hendriks, A. T. AU - Zeeman, G. PY - 2009 DA - 2009// TI - Pretreatments to enhance the digestibility of lignocellulosic biomass JO - Bioresour Technol VL - 100 UR - https://doi.org/10.1016/j.biortech.2008.05.027 DO - 10.1016/j.biortech.2008.05.027 ID - Hendriks2009 ER - TY - JOUR AU - Percival Zhang, Y. H. AU - Himmel, M. E. AU - Mielenz, J. R. PY - 2006 DA - 2006// TI - Outlook for cellulase improvement: screening and selection strategies JO - Biotechnol Adv VL - 24 UR - https://doi.org/10.1016/j.biotechadv.2006.03.003 DO - 10.1016/j.biotechadv.2006.03.003 ID - Percival Zhang2006 ER - TY - JOUR AU - Xu, Q. AU - Singh, A. AU - Himmel, M. E. PY - 2009 DA - 2009// TI - Perspectives and new directions for the production of bioethanol using consolidated bioprocessing of lignocellulose JO - Curr Opin Biotechnol VL - 20 UR - https://doi.org/10.1016/j.copbio.2009.05.006 DO - 10.1016/j.copbio.2009.05.006 ID - Xu2009 ER - TY - JOUR AU - Lynd, L. R. AU - van Zyl, W. H. AU - McBride, J. E. AU - Laser, M. PY - 2005 DA - 2005// TI - Consolidated bioprocessing of cellulosic biomass: an update JO - Curr Opin Biotechnol VL - 16 UR - https://doi.org/10.1016/j.copbio.2005.08.009 DO - 10.1016/j.copbio.2005.08.009 ID - Lynd2005 ER - TY - JOUR AU - Cardona, C. A. AU - Sánchez, O. J. PY - 2007 DA - 2007// TI - Fuel ethanol production: process design trends and integration opportunities JO - Bioresour Technol VL - 98 UR - https://doi.org/10.1016/j.biortech.2007.01.002 DO - 10.1016/j.biortech.2007.01.002 ID - Cardona2007 ER - TY - BOOK AU - Pandey, A. PY - 2009 DA - 2009// TI - Handbook of plant-based biofuels PB - CRC Press CY - Boca Raton ID - Pandey2009 ER - TY - JOUR AU - Olsson, L. AU - Hähnhagerdal, B. PY - 1993 DA - 1993// TI - Fermentative Performance of Bacteria and Yeasts in Lignocellulose Hydrolysates JO - Process Biochem VL - 28 UR - https://doi.org/10.1016/0032-9592(93)80041-E DO - 10.1016/0032-9592(93)80041-E ID - Olsson1993 ER - TY - JOUR AU - Lau, M. W. AU - Gunawan, C. AU - Balan, V. AU - Dale, B. E. PY - 2010 DA - 2010// TI - Comparing the fermentation performance of Escherichia coli KO11, Saccharomyces cerevisiae 424A(LNH-ST) and Zymomonas mobilis AX101 for cellulosic ethanol production JO - Biotechnol Biofuels VL - 3 UR - https://doi.org/10.1186/1754-6834-3-11 DO - 10.1186/1754-6834-3-11 ID - Lau2010 ER - TY - JOUR AU - van Zyl, W. H. AU - Lynd, L. R. AU - den Haan, R. AU - McBride, J. E. PY - 2007 DA - 2007// TI - Consolidated bioprocessing for bioethanol production using Saccharomyces cerevisiae JO - Biofuels VL - 108 UR - https://doi.org/10.1007/10_2007_061 DO - 10.1007/10_2007_061 ID - van Zyl2007 ER - TY - JOUR AU - Fujita, Y. AU - Ito, J. AU - Ueda, M. AU - Fukuda, H. AU - Kondo, A. PY - 2004 DA - 2004// TI - Synergistic saccharification, and direct fermentation to ethanol, of amorphous cellulose by use of an engineered yeast strain codisplaying three types of cellulolytic enzyme JO - Appl Environ Microbiol VL - 70 UR - https://doi.org/10.1128/AEM.70.2.1207-1212.2004 DO - 10.1128/AEM.70.2.1207-1212.2004 ID - Fujita2004 ER - TY - JOUR AU - Fujita, Y. AU - Takahashi, S. AU - Ueda, M. AU - Tanaka, A. AU - Okada, H. AU - Morikawa, Y. AU - Kawaguchi, T. AU - Arai, M. AU - Fukuda, H. AU - Kondo, A. PY - 2002 DA - 2002// TI - Direct and efficient production of ethanol from cellulosic material with a yeast strain displaying cellulolytic enzymes JO - Appl Environ Microbiol VL - 68 UR - https://doi.org/10.1128/AEM.68.10.5136-5141.2002 DO - 10.1128/AEM.68.10.5136-5141.2002 ID - Fujita2002 ER - TY - JOUR AU - Kondo, A. AU - Ueda, M. PY - 2004 DA - 2004// TI - Yeast cell-surface display–applications of molecular display JO - Appl Microbiol Biotechnol VL - 64 UR - https://doi.org/10.1007/s00253-003-1492-3 DO - 10.1007/s00253-003-1492-3 ID - Kondo2004 ER - TY - JOUR AU - Kotaka, A. AU - Bando, H. AU - Kaya, M. AU - Kato-Murai, M. AU - Kuroda, K. AU - Sahara, H. AU - Hata, Y. AU - Kondo, A. AU - Ueda, M. PY - 2008 DA - 2008// TI - Direct ethanol production from barley β-glucan by sake yeast displaying Aspergillus oryzae β-glucosidase and endoglucanase JO - J Biosci Bioeng VL - 105 UR - https://doi.org/10.1263/jbb.105.622 DO - 10.1263/jbb.105.622 ID - Kotaka2008 ER - TY - JOUR AU - Yamada, R. AU - Taniguchi, N. AU - Tanaka, T. AU - Ogino, C. AU - Fukuda, H. AU - Kondo, A. PY - 2011 DA - 2011// TI - Direct ethanol production from cellulosic materials using a diploid strain of Saccharomyces cerevisiae with optimized cellulase expression JO - Biotechnol Biofuels VL - 4 UR - https://doi.org/10.1186/1754-6834-4-8 DO - 10.1186/1754-6834-4-8 ID - Yamada2011 ER - TY - JOUR AU - Yanase, S. AU - Yamada, R. AU - Kaneko, S. AU - Noda, H. AU - Hasunuma, T. AU - Tanaka, T. AU - Ogino, C. AU - Fukuda, H. AU - Kondo, A. PY - 2010 DA - 2010// TI - Ethanol production from cellulosic materials using cellulase-expressing yeast JO - Biotechnol J VL - 5 UR - https://doi.org/10.1002/biot.200900291 DO - 10.1002/biot.200900291 ID - Yanase2010 ER - TY - JOUR AU - Ueda, M. AU - Tanaka, A. PY - 2000 DA - 2000// TI - Cell surface engineering of yeast: construction of arming yeast with biocatalyst JO - J Biosci Bioeng VL - 90 UR - https://doi.org/10.1016/S1389-1723(00)80099-7 DO - 10.1016/S1389-1723(00)80099-7 ID - Ueda2000 ER - TY - JOUR AU - Kondo, A. AU - Shigechi, H. AU - Abe, M. AU - Uyama, K. AU - Matsumoto, T. AU - Takahashi, S. AU - Ueda, M. AU - Tanaka, A. AU - Kishimoto, M. AU - Fukuda, H. PY - 2002 DA - 2002// TI - High-level ethanol production from starch by a flocculent Saccharomyces cerevisiae strain displaying cell-surface glucoamylase JO - Appl Microbiol Biotechnol VL - 58 UR - https://doi.org/10.1007/s00253-001-0900-9 DO - 10.1007/s00253-001-0900-9 ID - Kondo2002 ER - TY - JOUR AU - Matano, Y. AU - Hasunuma, T. AU - Kondo, A. PY - 2013 DA - 2013// TI - Simultaneous improvement of saccharification and ethanol production from crystalline cellulose by alleviation of irreversible adsorption of cellulase with a cell surface-engineered yeast strain JO - Appl Microbiol Biotechnol VL - 97 UR - https://doi.org/10.1007/s00253-012-4587-x DO - 10.1007/s00253-012-4587-x ID - Matano2013 ER - TY - JOUR AU - Shimoi, H. AU - Kitagaki, H. AU - Ohmori, H. AU - Iimura, Y. AU - Ito, K. PY - 1998 DA - 1998// TI - Sed1p is a major cell wall protein of Saccharomyces cerevisiae in the stationary phase and is involved in lytic enzyme resistance JO - J Bacteriol VL - 180 ID - Shimoi1998 ER - TY - JOUR AU - Jones, M. E. PY - 1992 DA - 1992// TI - Analysis of algebraic weighted least-squares estimators for enzyme parameters JO - Biochem J VL - 288 UR - https://doi.org/10.1042/bj2880533 DO - 10.1042/bj2880533 ID - Jones1992 ER - TY - JOUR AU - Ten, L. N. AU - Im, W. T. AU - Kim, M. K. AU - Kang, M. S. AU - Lee, S. T. PY - 2004 DA - 2004// TI - Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates JO - J Microbiol Methods VL - 56 UR - https://doi.org/10.1016/j.mimet.2003.11.008 DO - 10.1016/j.mimet.2003.11.008 ID - Ten2004 ER - TY - JOUR AU - van der Vaart, J. M. AU - te Biesebeke, R. AU - Chapman, J. W. AU - Toschka, H. Y. AU - Klis, F. M. AU - Verrips, C. T. PY - 1997 DA - 1997// TI - Comparison of cell wall proteins of Saccharomyces cerevisiae as anchors for cell surface expression of heterologous proteins JO - Appl Environ Microbiol VL - 63 ID - van der Vaart1997 ER - TY - JOUR AU - Yamada, R. AU - Taniguchi, N. AU - Tanaka, T. AU - Ogino, C. AU - Fukuda, H. AU - Kondo, A. PY - 2010 DA - 2010// TI - Cocktail δ-integration: a novel method to construct cellulolytic enzyme expression ratio-optimized yeast strains JO - Microb Cell Fact VL - 9 UR - https://doi.org/10.1186/1475-2859-9-32 DO - 10.1186/1475-2859-9-32 ID - Yamada2010 ER - TY - JOUR AU - Decker, C. H. AU - Visser, J. AU - Schreier, P. PY - 2000 DA - 2000// TI - β-glucosidases from five black Aspergillus species: study of their physico-chemical and biocatalytic properties JO - J Agric Food Chem VL - 48 UR - https://doi.org/10.1021/jf000434d DO - 10.1021/jf000434d ID - Decker2000 ER - TY - JOUR AU - Spellman, P. T. AU - Sherlock, G. AU - Zhang, M. Q. AU - Iyer, V. R. AU - Anders, K. AU - Eisen, M. B. AU - Brown, P. O. AU - Botstein, D. AU - Futcher, B. PY - 1998 DA - 1998// TI - Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization JO - Mol Biol Cell VL - 9 UR - https://doi.org/10.1091/mbc.9.12.3273 DO - 10.1091/mbc.9.12.3273 ID - Spellman1998 ER - TY - JOUR AU - Pittet, M. AU - Conzelmann, A. PY - 2007 DA - 2007// TI - Biosynthesis and function of GPI proteins in the yeast Saccharomyces cerevisiae JO - Biochim Biophys Acta VL - 1771 UR - https://doi.org/10.1016/j.bbalip.2006.05.015 DO - 10.1016/j.bbalip.2006.05.015 ID - Pittet2007 ER - TY - JOUR AU - Caro, L. H. AU - Tettelin, H. AU - Vossen, J. H. AU - Ram, A. F. AU - van den Ende, H. AU - Klis, F. M. PY - 1997 DA - 1997// TI - In silicio identification of glycosyl-phosphatidylinositol-anchored plasma-membrane and cell wall proteins of Saccharomyces cerevisiae JO - Yeast VL - 13 UR - https://doi.org/3.0.CO;2-L DO - 3.0.CO;2-L ID - Caro1997 ER - TY - JOUR AU - Vossen, J. H. AU - Müller, W. H. AU - Lipke, P. N. AU - Klis, F. M. PY - 1997 DA - 1997// TI - Restrictive glycosylphosphatidylinositol anchor synthesis in cwh6/gpi3 yeast cells causes aberrant biogenesis of cell wall proteins JO - J Bacteriol VL - 179 ID - Vossen1997 ER - TY - JOUR AU - Hamada, K. AU - Fukuchi, S. AU - Arisawa, M. AU - Baba, M. AU - Kitada, K. PY - 1998 DA - 1998// TI - Screening for glycosylphosphatidylinositol (GPI)-dependent cell wall proteins in Saccharomyces cerevisiae JO - Mol Gen Genet VL - 258 UR - https://doi.org/10.1007/s004380050706 DO - 10.1007/s004380050706 ID - Hamada1998 ER - TY - JOUR AU - Hamada, K. AU - Terashima, H. AU - Arisawa, M. AU - Yabuki, N. AU - Kitada, K. PY - 1999 DA - 1999// TI - Amino acid residues in the ω-minus region participate in cellular localization of yeast glycosylphosphatidylinositol-attached proteins JO - J Bacteriol VL - 181 ID - Hamada1999 ER - TY - JOUR AU - Frieman, M. B. AU - Cormack, B. P. PY - 2003 DA - 2003// TI - The ω-site sequence of glycosylphosphatidylinositol-anchored proteins in Saccharomyces cerevisiae can determine distribution between the membrane and the cell wall JO - Mol Microbiol VL - 50 UR - https://doi.org/10.1046/j.1365-2958.2003.03722.x DO - 10.1046/j.1365-2958.2003.03722.x ID - Frieman2003 ER - TY - JOUR AU - van der Vaart, J. M. AU - Caro, L. H. AU - Chapman, J. W. AU - Klis, F. M. AU - Verrips, C. T. PY - 1995 DA - 1995// TI - Identification of three mannoproteins in the cell wall of Saccharomyces cerevisiae JO - J Bacteriol VL - 177 ID - van der Vaart1995 ER - TY - JOUR AU - Doering, T. L. AU - Schekman, R. PY - 1996 DA - 1996// TI - GPI anchor attachment is required for Gas1p transport from the endoplasmic reticulum in COP II vesicles JO - EMBO J VL - 15 ID - Doering1996 ER - TY - JOUR AU - Dupres, V. AU - Dufrêne, Y. F. AU - Heinisch, J. J. PY - 2010 DA - 2010// TI - Measuring cell wall thickness in living yeast cells using single molecular rulers JO - ACS Nano VL - 4 UR - https://doi.org/10.1021/nn101598v DO - 10.1021/nn101598v ID - Dupres2010 ER - TY - JOUR AU - Schreuder, M. P. AU - Mooren, A. T. AU - Toschka, H. Y. AU - Verrips, C. T. AU - Klis, F. M. PY - 1996 DA - 1996// TI - Immobilizing proteins on the surface of yeast cells JO - Trends Biotechnol VL - 14 UR - https://doi.org/10.1016/0167-7799(96)10017-2 DO - 10.1016/0167-7799(96)10017-2 ID - Schreuder1996 ER - TY - JOUR AU - Shimojyo, R. AU - Furukawa, H. AU - Fukuda, H. AU - Kondo, A. PY - 2003 DA - 2003// TI - Preparation of yeast strains displaying IgG binding domain ZZ and enhanced green fluorescent protein for novel antigen detection systems JO - J Biosci Bioeng VL - 96 UR - https://doi.org/10.1016/S1389-1723(03)70137-6 DO - 10.1016/S1389-1723(03)70137-6 ID - Shimojyo2003 ER - TY - JOUR AU - Wu, H. AU - Zheng, X. AU - Araki, Y. AU - Sahara, H. AU - Takagi, H. AU - Shimoi, H. PY - 2006 DA - 2006// TI - Global gene expression analysis of yeast cells during sake brewing JO - Appl Environ Microbiol VL - 72 UR - https://doi.org/10.1128/AEM.01097-06 DO - 10.1128/AEM.01097-06 ID - Wu2006 ER - TY - JOUR AU - Dashtban, M. AU - Schraft, H. AU - Qin, W. PY - 2009 DA - 2009// TI - Fungal bioconversion of lignocellulosic residues; opportunities & perspectives JO - Int J Biol Sci VL - 5 UR - https://doi.org/10.7150/ijbs.5.578 DO - 10.7150/ijbs.5.578 ID - Dashtban2009 ER - TY - JOUR AU - Stricker, A. R. AU - Mach, R. L. AU - de Graaff, L. H. PY - 2008 DA - 2008// TI - Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei) JO - Appl Microbiol Biotechnol VL - 78 UR - https://doi.org/10.1007/s00253-007-1322-0 DO - 10.1007/s00253-007-1322-0 ID - Stricker2008 ER - TY - JOUR AU - Katahira, S. AU - Mizuike, A. AU - Fukuda, H. AU - Kondo, A. PY - 2006 DA - 2006// TI - Ethanol fermentation from lignocellulosic hydrolysate by a recombinant xylose- and cellooligosaccharide-assimilating yeast strain JO - Appl Microbiol Biotechnol VL - 72 UR - https://doi.org/10.1007/s00253-006-0402-x DO - 10.1007/s00253-006-0402-x ID - Katahira2006 ER - TY - JOUR AU - Brachmann, C. B. AU - Davies, A. AU - Cost, G. J. AU - Caputo, E. AU - Li, J. AU - Hieter, P. AU - Boeke, J. D. PY - 1998 DA - 1998// TI - Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications JO - Yeast VL - 14 UR - https://doi.org/3.0.CO;2-2 DO - 3.0.CO;2-2 ID - Brachmann1998 ER - TY - JOUR AU - Cha-aim, K. AU - Fukunaga, T. AU - Hoshida, H. AU - Akada, R. PY - 2009 DA - 2009// TI - Reliable fusion PCR mediated by GC-rich overlap sequences JO - Gene VL - 434 UR - https://doi.org/10.1016/j.gene.2008.12.014 DO - 10.1016/j.gene.2008.12.014 ID - Cha-aim2009 ER - TY - JOUR AU - Gibson, D. G. AU - Young, L. AU - Chuang, R. Y. AU - Venter, J. C. AU - Hutchison, C. A. AU - Smith, H. O. PY - 2009 DA - 2009// TI - Enzymatic assembly of DNA molecules up to several hundred kilobases JO - Nat Methods VL - 6 UR - https://doi.org/10.1038/nmeth.1318 DO - 10.1038/nmeth.1318 ID - Gibson2009 ER - TY - JOUR AU - Chen, D. C. AU - Yang, B. C. AU - Kuo, T. T. PY - 1992 DA - 1992// TI - One-step transformation of yeast in stationary phase JO - Curr Genet VL - 21 UR - https://doi.org/10.1007/BF00318659 DO - 10.1007/BF00318659 ID - Chen1992 ER - TY - JOUR AU - Ismail, K. S. AU - Sakamoto, T. AU - Hatanaka, H. AU - Hasunuma, T. AU - Kondo, A. PY - 2013 DA - 2013// TI - Gene expression cross-profiling in genetically modified industrial Saccharomyces cerevisiae strains during high-temperature ethanol production from xylose JO - J Biotechnol VL - 163 UR - https://doi.org/10.1016/j.jbiotec.2012.10.017 DO - 10.1016/j.jbiotec.2012.10.017 ID - Ismail2013 ER - TY - JOUR AU - Matano, Y. AU - Hasunuma, T. AU - Kondo, A. PY - 2012 DA - 2012// TI - Display of cellulases on the cell surface of Saccharomyces cerevisiae for high yield ethanol production from high-solid lignocellulosic biomass JO - Bioresour Technol VL - 108 UR - https://doi.org/10.1016/j.biortech.2011.12.144 DO - 10.1016/j.biortech.2011.12.144 ID - Matano2012 ER - TY - JOUR AU - Hasunuma, T. AU - Sung, K. AU - Sanda, T. AU - Yoshimura, K. AU - Matsuda, F. AU - Kondo, A. PY - 2011 DA - 2011// TI - Efficient fermentation of xylose to ethanol at high formic acid concentrations by metabolically engineered Saccharomyces cerevisiae JO - Appl Microbiol Biotechnol VL - 90 UR - https://doi.org/10.1007/s00253-011-3085-x DO - 10.1007/s00253-011-3085-x ID - Hasunuma2011 ER -