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Table 1 Differential gene expression profile on five crop residues

From: A transcriptomic analysis of Neurospora crassa using five major crop residues and the novel role of the sporulation regulator rca-1 in lignocellulase production

 

BS

CS

RS

SS

WS

Upregulated genes

656

888

738

524

742

 “Common” ratea

65.5%

48.4%

58.3%

82.1%

58.0%

 “No-carbon” rateb

60.7%

63.6%

62.6%

57.6%

62.1%

Downregulated genes

76

253

117

141

101

 “Common” rate

72.4%

21.7%

47.0%

39.0%

54.5%

 “No-carbon” rate

60.5%

78.3%

63.2%

46.1%

63.4%

  1. BS barley straw, CS corn straw, RS rice straw, SS soybean straw, WS wheat straw.
  2. aGenes commonly regulated by all five straws versus sucrose as a sole carbon source; “no-carbon” data were derived from a reference [20].
  3. bGenes regulated in the no-carbon condition versus sucrose as a sole carbon source.
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Biotechnology for Biofuels and Bioproducts

ISSN: 2731-3654

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