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Table 1 Secreted proteins shared by WT and RE-10

From: Redesigning the regulatory pathway to enhance cellulase production in Penicillium oxalicum

Gene ID

Function description

Signal peptides

Coverage (WT/RE-10)

Total peptides (WT/RE-10)

Unique peptides (WT/RE-10)

MW [kDa]

Calc. pI

PDE_01261

Putative cellulose monooxygenase

Y

4.79/24.79

1/3

1/1

36.2

5.9

PDE_01335

Hypothetical protein

Y

26.16/22.09

3/2

3/2

18.4

4.97

PDE_01354

Starch and chitin binding domain-containing

Y

6.7/23.82

6/8

6/7

42.8

6.38

PDE_01796

Hypothetical protein

Y

36.27/36.27

4/6

4/6

19.9

4.92

PDE_02101

Putative endo-beta-1,4-xylanase

Y

10.65/10.65

3/3

3/3

31.3

6.96

PDE_02102

Putative swollenin

Y

8.62/45.29

2/18

1/16

51.9

5.05

PDE_02392

Hypothetical protein

N

10.26/6.62

3/2

1/1

64.4

7.56

PDE_02514

Putative alpha-galactosidase

Y

11.64/14.69

3/3

1/2

55

6.24

PDE_02536

Hypothetical protein

Y

24.87/24.87

7/5

7/4

18.6

5.01

PDE_02682

Putative endo-beta-1,4-xylanase

Y

3.46/3.46

1/1

1/1

29.5

6.28

PDE_03112

Putative exo-beta-1,3-glucanase

Y

18.62/7.29

7/3

7/3

50.3

4.79

PDE_03255

Hypothetical protein

Y

82.31/40.82

7/3

7/3

15

5.26

PDE_03292

Chitin binding domain-containing protein

Y

4.43/4.43

1/1

1/1

27.6

4.41

PDE_03437

Hypothetical protein

Y

9.33/6.22

3/2

2/2

23.4

5.45

PDE_03452

Putative beta-1,3-glucanosyltransglycosylase

Y

2.43/4.85

1/2

1/1

57

5.22

PDE_03466

Putative rhamnogalacturonase

Y

17.01/27.13

5/7

3/5

47

6.6

PDE_03659

Hypothetical protein

N

12.17/4.52

4/2

1/1

86.7

6.61

PDE_03916

Hypothetical protein

Y

15.17/20.3

3/4

1/1

51.2

5.64

PDE_03934

Hypothetical protein

Y

19.73/18.37

3/1

2/1

15.7

6.95

PDE_04162

Putative endopolygalacturonase

Y

12.89/14.74

3/3

2/3

38.4

5.85

PDE_04182

Putative acetyl xylan esterase

Y

59.83/51.28

11/6

11/5

24

7.15

PDE_04519

Hypothetical protein

Y

29.63/8.47

3/1

3/1

19.6

4.81

PDE_05305

Hypothetical protein

Y

8.14/10.98

1/2

1/1

59.7

5.17

PDE_05445

Putative cellobiohydrolase

Y

14.57/20.09

5/7

4/1

48.1

4.91

PDE_05537

Hypothetical protein

N

2.34/3.89

1/2

1/1

68.5

5.01

PDE_06023

Putative beta-1,4-mannanase

Y

7.01/41.86

1/7

1/6

47.4

5.33

PDE_06089

Hypothetical protein

Y

30.12/39.76

4/4

4/4

18.1

7.37

PDE_06128

Hypothetical protein

Y

19.21/19.21

4/3

4/3

16.6

5.22

PDE_06138

Ecm33 domain-containing protein

Y

37.66/7.73

17/3

16/3

41.9

5.12

PDE_06252

Hypothetical protein

N

16.42/16.22

8/12

1/1

115.7

7.09

PDE_06439

Putative endo-beta-1,4-glucanase

Y

8.86/37.97

2/6

2/5

25.5

6.52

PDE_06649

Putative feruloyl esterase

Y

11.44/3.23

1/1

1/1

35.7

7.74

PDE_06677

Hypothetical protein

Y

9.26/27.31

2/1

2/1

23.1

5.07

PDE_06697

Hypothetical protein

N

8.65/11.78

4/2

1/1

128.2

7.28

PDE_07033

Hypothetical protein

Y

14.99/4.5

3/1

1/1

50.4

5.34

PDE_07073

Hypothetical protein

N

6.27/2.53

3/2

1/1

118.1

5.86

PDE_07106

Hypothetical protein

Y

44.14/71.03

5/6

4/6

15.1

8.47

PDE_07124

Cellobiohydrolase Cel6A

Y

55.39/56.25

13/22

10/22

48.5

5.67

PDE_07928

Endo-beta-1,4-glucanase Cel45A

Y

9.77/8.65

3/2

3/2

26.9

4.84

PDE_07929

Endo-beta-1,4-glucanase Cel7B

Y

26.37/36.29

8/12

7/10

49.3

5.26

PDE_07938

Putative polygalacturonase

Y

23.72/25.07

6/6

6/5

37.6

5.14

PDE_07945

Cellobiohydrolase CBHI/Cel7A-2

Y

45.05/45.6

22/28

19/25

56.9

5.12

PDE_08075

Hypothetical protein

Y

21.18/5.9

4/1

3/1

27.7

4.02

PDE_08094

Putative endo-beta-1,4-xylanase

Y

23.41/61.95

5/20

5/19

43.5

6.42

PDE_08650

Hypothetical protein

N

6.43/8.55

11/13

1/1

359.1

7.17

PDE_09226

Putative endo-beta-1,4-glucanase

Y

43.1/49.15

13/20

13/20

44

5.21

PDE_09278

Putative acetyl xylan esterase

Y

15.91/31.82

3/7

2/7

41.3

7.84

PDE_09285

Putative alpha-L-rhamnopyranohydrolase

Y

41.08/31.4

12/10

10/9

51.4

4.92

PDE_09289

Hypothetical protein

Y

9.64/9.64

1/2

1/1

18

4.83

PDE_09417

Glucoamylase Amy15A

Y

41.1/51.02

30/25

30/25

67.2

6.01

PDE_09969

Endo-beta-1,4-glucanase Cel5C

Y

21.47/41.5

8/16

7/16

65

5.82