Transcriptomic analysis of a moderately growing subisolate Botryococcus braunii 779 (Chlorophyta) in response to nitrogen deprivation

Table 4 List of the top 25 most up-regulated ESTs upon ND in B. braunii 779

Rk^a	EST_ID^b	BH_ID^c	logFC	p value	Description^d
1	c39922_g1_i1	Ost9901_3\|32601	12.06	1.2E−13	Ammonia permease
2	c63389_g1_i3	Coc_C169_1\|23517	10.56	4.1E−09	Glutamine synthetase
3	c9966_g1_i1	Chlre4\|188119	10.36	3.6E−09	Oxidoreductase
4	c27174_g1_i1	Coc_C169_1\|52379	9.57	8.9E–09	Glycogen phosphorylase
5	c60040_g1_i1	Coc_C169_1\|32937	9.49	1.3E−08	Pyruvate kinase
6	c90800_g1_i1	ChlNC64A_1\|143431	9.48	2.3E−09	Glutamine synthetase
7	c71872_g1_i2	Ost9901_3\|50765	9.19	2.8E−10	Sulfite reductase
8	c52649_g1_i1	Coc_C169_1\|52379	8.65	1.0E−07	Glycogen phosphorylase
9	c81537_g1_i1	Chlre4\|206116	8.04	4.1E−08	Unknown
10	c67134_g2_i2	MicpuN3\|63658	7.94	1.3E−06	Glutamate synthase
11	c78877_g1_i1	Chlre4\|140452	7.77	5.1E−07	Unknown
12	c49437_g1_i2	MicpuN3\|97997	7.67	1.2E−06	Unknown
13	c9210_g1_i2	Chlre4\|132210	7.66	1.7E−07	3-phosphoglycerate kinase
14	c70762_g1_i7	Chlre4\|140487	7.65	1.8E−07	Glutamate synthase
15	c59003_g1_i1	MicpuN3\|63658	7.45	9.2E−06	Glutamate synthase
16	c19522_g1_i1	Thaps3\|21748	7.24	6.4E−07	Fructose 1,6-bisphosphate aldolase
17	c20385_g1_i1	Ost9901_3\|30705	7.14	9.0E−07	Cohesin subunit
18	c27189_g1_i1	Thaps3\|27187	6.88	2.4E−07	Transaldolase
19	c24873_g1_i2	MicpuN3\|89262	6.88	1.3E−06	FOG: RCC1 domain
20	c51175_g1_i1	Coc_C169_1\|29458	6.87	3.8E−06	Citrate synthase
21	c47749_g1_i1	Coc_C169_1\|9065	6.87	1.0E−07	Transcription factors
22	c61180_g1_i2	Chlre4\|205746	6.79	7.9E−06	Glutamate synthase
23	c2096_g1_i1	MicpuN3\|82943	6.76	4.0E−07	RNA Helicase
24	c36160_g1_i3	Thaps3\|262283	6.74	5.6E−07	Acyl-CoA synthetase
25	c27223_g1_i2	Thaps3\|269844	6.71	4.0E−07	UDP-glucuronosyl transferase

^aRk stands for rank (i.e., by ratio).
^bEST_ID for B. braunii ESTs.
^cBH_ID for ID of the best-hit.
^dDescription is based on the KOG annotation associated with the 6 completed algal genomes in JGI (see text).

ISSN: 2731-3654