Skip to main content

Table 5 List of the top 25 most down-regulated ESTs upon ND in B. braunii 779

From: Transcriptomic analysis of a moderately growing subisolate Botryococcus braunii 779 (Chlorophyta) in response to nitrogen deprivation

Rka EST_IDb BH_IDc logFC p value Descriptiond
1 c73365_g3_i6 Coc_C169_1|45719 −4.55 6.4E−03 Unknown
2 c54903_g1_i1 Coc_C169_1|45718 −4.40 2.5E−03 Tyrosine kinase
3 c72890_g1_i2 ChlNC64A_1|144962 −4.20 1.8E−03 Prolylcarboxypeptidase
4 c69499_g1_i5 Chlre4|149722 −4.18 4.5E−03 Unknown
5 c66708_g1_i4 Coc_C169_1|65911 −3.98 2.8E−04 Collagens
6 c72757_g1_i1 Coc_C169_1|17756 −3.54 1.5E−03 Isocitrate lyase
7 c66635_g1_i1 ChlNC64A_1|139124 −3.46 2.8E−03 Nuclear receptor coregulator
8 c32919_g1_i2 Coc_C169_1|18195 −3.44 2.1E−04 Aspartate aminotransferase
9 c71206_g1_i2 Coc_C169_1|62318 −3.36 2.0E−02 UDP-glucuronosyl transferase
10 c68672_g1_i4 Coc_C169_1|65911 −3.31 9.4E−04 Collagens
11 c55715_g1_i1 Coc_C169_1|68180 −3.27 6.9E−04 Ca2+-dependent protein kinase
12 c71767_g1_i2 Chlre4|104719 −3.23 5.1E−03 ATP-dependent RNA helicase
13 c69499_g1_i4 Chlre4|149722 −3.16 1.7E−02 Unknown
14 c73427_g1_i1 Coc_C169_1|35165 −3.01 1.0E−02 O-linked GlcNAc transferase
15 c66185_g1_i1 Coc_C169_1|33465 −3.01 1.6E−02 Unknown
16 c67100_g1_i1 Chlre4|130199 −3.01 2.2E−02 Acetylglutamate kinase
17 c71718_g1_i18 Coc_C169_1|68054 −3.01 4.4E−03 Ca2+-permeable cation channel
18 c70935_g1_i8 Coc_C169_1|13500 −3.00 4.4E−03 Unknown
19 c51991_g1_i1 Coc_C169_1|63373 −2.99 1.2E−02 Diacylglycerol acyltransferase
20 c74265_g5_i3 Coc_C169_1|30369 −2.94 3.9E−03 Malate synthase
21 c73301_g5_i1 Coc_C169_1|17144 −2.94 1.5E−02 Serine/threonine protein kinase
22 c71077_g1_i3 ChlNC64A_1|59702 −2.94 8.1E−03 Unknown
23 c73505_g1_i1 Coc_C169_1|41290 −2.92 2.0E−03 Unknown
24 c74003_g1_i7 Coc_C169_1|35165 −2.89 6.3E−03 O-linked GlcNAc transferase
25 c62188_g1_i1 Coc_C169_1|11065 −2.89 9.6E−03 Sensory transduction histidine kinase
  1. aRk stands for rank (i.e., by inverse ratio).
  2. bEST_ID for B. braunii ESTs.
  3. cBH_ID for ID of the best-hit.
  4. dDescription is based on the KOG annotation associated with the 6 completed algal genomes in JGI (see text).