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Table 1 MFS domain proteins in A. niger and S. cerevisiae

From: Aspergillus niger membrane-associated proteome analysis for the identification of glucose transporters

 

N tot

N tmHMM

N MFS

N SP

N gluT

N gluT (d min)

N gluT (MCCmax)

A. niger ATCC1015

11,910

2561

469

256

252

19

5

S. cerevisiae CEN.PK

5439

1022

73

43

45

15

12

  1. N tot total number of predicted proteins, N tmHMM number of proteins containing at least one transmembrane helix domain, N MFS number of proteins containing a MFS domain, N SP number of proteins containing an SP domain, N gluT number of proteins above inclusion threshold of HMMgluT (as given by the HMMER3.0 tool), N gluT (d min ) number of proteins above the inferred threshold score at d min, N gluT (MCC max ) number of proteins above the inferred threshold score at MCCmax
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Biotechnology for Biofuels and Bioproducts

ISSN: 2731-3654

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