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Table 4 Relative abundance and HMM scores of MFS porter proteins detected in the three growth conditions

From: Aspergillus niger membrane-associated proteome analysis for the identification of glucose transporters

protID

HMMgluT

HMMSP

HMMMFS

Relative abundance ± sd (%) × 100

Remark

Sorbitol

Sorbitol + 1 mM glucose

Sorbitol + 60 mM glucose

1121621

653.1

467

78.5

9.08 ± 1.02

11.89 ± 4.79

9.47 ± 3.50

MstC (Q8J0U9)

1142882

583.1

464.5

74.8

2.24 ± 0.48

4.47 ± 0.20

n.d.

MstG

1143598

559.3

411.7

86.1

6.38 ± 1.83

17.54 ± 2.39

n.d

MstH

1143191

535

420

75.7

8.51e−3 ± 1.14e−3

n.d.

n.d.

MstA (Q8J0V1)

1101809

364.4

364.7

85.6

4.83 ± 0.51

2.01 ± 0.29

n.d.

 

1180703

339.2

346.3

97.4

n.d.

n.d.

1.37 ± 0.14

MstD (Q8J0U8)

1188093

312.9

289.3

82.0

1.08 ± 0.39

0.82 ± 0.11

0.82 ± 0.25

 

1144791

308.1

289.6

55.9

6.25 ± 1.25

n.d.

n.d.

 

1189214

177.3

230.6

73.7

0.29 ± 0.03

n.d.

n.d.

 

1128338

57.6

103.6

72.9

3.70 ± 0.32

4.36 ± 0.02

6.46 ± 0.84

 

1111630

46.4

101.6

63.2

n.d.

n.d.

1.06 ± 0.10

 

1184634

46

76.4

0

0.30 ± 4.12e−5

n.d.

n.d.

 

1122202

44.6

52.6

135.9

0.87 ± 0.10

n.d.

0.48 ± 0.29

 

1178623

42.9

68.3

149.3

n.d.

n.d.

4.71 ± 1.07

 

1164538; 1188786

37.5; 37.4

82.3; 72.1

104.3; 98.9

2.11 ± 0.14

n.d.

2.60 ± 0.21

Same protein groupa

1089440

21.4

0

92.5

n.d.

1.16 ± 0.12

n.d.

 

1118545

19.1

0

0

n.d.

n.d.

3.87 ± 1.13

 

1105147

0

0

54.4

8.93 ± 0.03

7.14 ± 2.01

11.47 ± 1.24

 

1129336

0

0

31.8

0.34 ± 0.01

0.50 ± 0.10

1.07 ± 0.01

 

1124902

0

0

130.7

n.d.

n.d.

1.37 ± 0.44

 

1165706

0

0

114.3

n.d.

n.d.

0.05 ± 0.01

 

1188840

0

0

99.1

n.d.

n.d.

3.00 ± 1.30

 

1146101

0

0

65.3

n.d.

n.d.

1.21 ± 0.91

 
  1. UniProt accession numbers in brackets
  2. n.d. not detected in one or both of the biological replicates
  3. aThese proteins could not be distinguished by the proteomics analysis and were thus grouped together to one protein group