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Table 2 Strains, plasmids, and primers used in this study

From: Metabolic engineering of Bacillus subtilis for redistributing the carbon flux to 2,3-butanediol by manipulating NADH levels

Bacterial strain, plasmid or primer

Relevant characteristic or sequence

Source or restriction

Strains

 B. subtilis ACR

B. subtilis 168 with pMA5-HpaII-acr, source of yodC and ldhA genes

Lab stock

 B. subtilis AY

B. subtilis ACR blocked in YodC by insertion of a Cat expression cassette

This study

 B. subtilis AFY

B. subtilis ACR blocked in YodC by insertion of fdh gene

This study

 B. subtilis AFYL

B. subtilis AFY blocked in LdhA by insertion of a CAT expression cassette

This study

 E. coli JM109

recA1, endA1, gyrA96, thi-1, hsd R17(rk- mk +)supE44

Invitrogen

 Candida boidinii

Source of fdh gene

Lab stock

Plasmids

  

 pMD18-T

Cloning vector

Takara

 pBGSC6

Containing Cat expression cassette

Lab stock

 pMA5-HpaII

Expression vector (in E. coli, Apr; in B. subtilis, Kanr)

Lab stock

 T-cat

pMD18-T with Cat expression cassette

This study

 T-yodC

pMD18-T with yodC

This study

 T-yodC::cat

cat inserted into the EcoR V site of T-yodC

This study

 T-fdh

pMD18-T with fdh

This study

pMA5-fdh

pMA5-HpaII with fdh

 

 T-HpaII-fdh

pMD18-T with HpaII-fdh

This study

 T-yodC::fdh

fdh inserted into the Eco47 III site of T-yodC

This study

 T-ldhA

pMD18-T with ldhA

This study

 T-ldhA::cat

cat inserted into the EcoR V site of T-ldhA

This study

Primers 5′-3′

  

 P1

ACCGGGATCCATGACGAATACTCTGGAT

BamH I

 P2

ACCGACGCGTTTACAGCCAAGTTGATAC

Mlu I

 P3

CGCGATATCAAAAAAGGATTGATTCTAATG

EcoR V

 P4

CGCGATATCTAGTGACATTAGAAAACCGAC

EcoR V

 P5

CGCCATATGATGAAGATCGTTTTAGTC

Nde I

 P6

CGCACGCGTTTATTTCTTATCGTGTTTAC

Mlu I

 P7

ACCGAGCGCTATTTTTTGAGTGATCTTCTC

Eco47 III

 P8

ACCGAGCGCTTTATTTCTTATCGTGTTTAC

Eco47 III

 P9

ACCGGGATCCATGATGAACAAACATG

BamH I

 P10

ACCGACGCGTTTAGTTGACTTTTTGTTCTG

Mlu I

  1. Underlined nucleotides are the restriction enzyme sites