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Table 3 Comparisons of homologues between D. tertiolecta and other five green algae with reference genome sequences

From: RNA-Seq transcriptomic analysis with Bag2D software identifies key pathways enhancing lipid yield in a high lipid-producing mutant of the non-model green alga Dunaliella tertiolecta

Algal reference Cre Csu Olu Vca ChlN
Reference Transcripts or proteins # 19,526 9629 7796 15,285 9791
BlastN
 Transcript hit (E-value = 0) 82 (0.42 %) 18 (0.19 %) 0 (0.00 %) 24 (0.16 %) 20 (0.20 %)
 Transcript hit (E-value ≤10−10) 574 (2.94 %) 229 (2.38 %) 15 (0.19 %) 246 (1.61 %) 281 (2.87 %)
 Transcript hit (E-value ≤10−6) 611 (3.13 %) 249 (2.59 %) 16 (0.21 %) 269 (1.76 %) 307 (3.14 %)
 Transcript hit (E-value ≤10−3) 654 (3.35 %) 252 (2.62 %) 16 (0.21 %) 278 (1.82 %) 315 (3.22 %)
BlastX
Transcript hit (E-value = 0) 583 (2.99 %) 356 (3.70 %) 205 (2.63 %) 523 (3.42 %) 239 (2.44 %)
Transcript hit (E-value ≤10−10) 6610 (33.85 %) 5025 (52.19 %) 4002 (51.33 %) 6249 (40.88 %) 5106 (52.15 %)
Transcript hit (E-value ≤10−6) 7023 (35.97 %) 5643 (58.60 %) 4592 (58.90 %) 6986 (45.70 %) 5773 (58.96 %)
Transcript hit (E-value ≤10−3) 8561 (43.84 %) 6393 (66.39 %) 5267 (67.56 %) 8162 (53.40 %) 6604 (67.45 %)
  1. The numbers before and within brackets are the number of D. tertiolecta transcripts with Blast hits from reference alga and the hitting percentage in the corresponding reference transcripts/proteins
  2. Cre, C. reinhardtii; Csu, C. subellipsoidea; Olu, O. lucimarinus; Vca, V. carteri; ChlN, C. variabillis N64A