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Table 3 List of the TRs predicted to orchestrate the transcriptional response during N starvation

From: Transcriptional program for nitrogen starvation-induced lipid accumulation in Chlamydomonas reinhardtii

Stage Name Description Timestamp (min) Trend Predicted regulated modules
Early Cre13.g573000 SET domain methyltransferase 12 Down 40, 113, 162, 197, 127
BLZ8 Basic region leucine zipper 13 Down 105, 121
RWP11 RWP-RK TF 15 Up 150
Cre17.g746547 bZIP TF 15 Down 105, 121
Mid CGL86 Nuclear inhibitor of protein phosphatase-1 26 Down 129, 130, 99, 172, 13, 45, 82, 148
NAT11 Acetyltransferase (GNAT) 30 Down 129
RWP1 RWP-RK domain protein 36 Up 130, 99, 13, 45, 82, 148
NAT1 Acetyltransferase (GNAT) 37 Down 200, 178, 93, 174
NRR1 SBP domain 44 Up 82, 67
RWP4 RWP-RK domain-containing protein 48 Up 193, 98, 35, 37, 72, 170, 45, 142, 175, 59, 99, 53, 87, 27, 95
GSM1 Gamete-specific minus 1 50 Up 193, 98, 35, 37, 166, 172, 45, 175, 99, 59, 67, 53, 54, 87, 27, 149
Cre12.g523000 Zinc finger CCCH domain containing protein 62 Up 149, 193, 98, 35, 37, 102, 170, 172, 45, 142, 175, 99, 59, 67, 53, 54, 87, 185, 27, 211, 95
Late CGL107 Histone-like transcription factor (CBF/NF-Y) 109 Up 193, 8, 9, 141, 50, 24, 154, 59, 92, 158
Cre09.g386753 DNA binding protein S1FA 109 Down 98, 35, 166, 172, 175, 67, 149, 27
NAB1 Nucleic acid binding protein 146 Down 33, 34, 133, 104, 76, 144, 136, 210, 21, 151, 57, 186
NAT31 Acetyltransferase (GNAT) 371 Up 104, 136, 133
Cre03.g152150 Zinc finger C2H2 type domain 418 Down 129, 13
  1. Seventeen differentially expressed TRs during N starvation have a predicted significant influence on at least one transcriptional module. TR name and description, first time point of differential expression (timestamp) and predicted influenced modules are indicated