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Table 1 MIPS functional catalog category classification of all the genes specifically up-regulated in pkaA deletion strain

From: Aspergillus nidulans protein kinase A plays an important role in cellulase production

Functional category Genes p value
01 Metabolism   
 01.01.03.01.01 biosynthesis of glutamine 3 0.0382
 01.01.09.04 metabolism of phenylalanine 17 0.0260
 01.01.09.04.01 biosynthesis of phenylalanine 11 0.0340
 01.01.11.02.02 degradation of isoleucine 5 0.0171
 01.01.11.03.02 degradation of valine 5 0.0232
 01.01.11.04 metabolism of leucine 11 0.0058
 01.01.11.04.02 degradation of leucine 9 0.0033
 01.02 nitrogen, sulfur and selenium metabolism 43 0.0389
 01.05.03 polysaccharide metabolism 41 0.0114
 01.05.06 C-2 compound and organic acid metabolism 9 0.0368
 01.06.05 fatty acid metabolism 39 0.0035
 01.20.01.05 metabolism of sugar alcohols 4 0.0047
 01.20.01.09 metabolism of aminoglycoside antibiotics 3 0.0238
 01.20.07 metabolism of propionic acid derivatives 2 0.0373
02 Energy   
 02.01 glycolysis and gluconeogenesis 18 0.0419
 02.07 pentose-phosphate pathway 12 0.0219
 02.16 fermentation 28 0.0413
 02.16.01 alcohol fermentation 10 0.0230
 02.16.03 lactate fermentation 6 0.0069
 02.25 oxidation of fatty acids 22 0.0145
14 Protein fate (folding, modification, destination)   
 14.07.11.01 autoproteolytic processing 7 0.0128
 14.13 protein/peptide degradation 64 0.0002
 14.13.01 cytoplasmic and nuclear protein degradation 40 0.0124
 14.13.04 lysosomal and vacuolar protein degradation 14 0.0073
 14.13.04.02 vacuolar protein degradation 9 0.0097
18 Regulation metabolism and protein function   
 18.02.10 regulation of channel activity 2 0.03735
20 Cellular transp., transp. facilities and routes  
 20.01.03 C-compound and carbohydrate transport 44 0.03095
 20.09.18 cellular import 73 0.01043
 20.09.18.07 non-vesicular cellular import 44 0.00332
 20.09.03 peroxisomal transport 10 0.00743
30 Cellular communication/signal transduct. mechanism  
 30.01.05.03 protease mediated signal transduction 2 0.03735
 30.01.09.03 Ca2+-mediated signal transduction 8 0.00950
32 Cell rescue, defense and virulence   
 32.01.04 pH stress response 3 0.03822
 32.01.05 heat-shock response 11 0.00852
 32.07.03 detoxification by modification 11 0.03405
 32.07.07 oxygen and radical detoxification 11 0.03405
 32.07.07.03 glutathione conjugation reaction 4 0.04179
 32.07.07.07 superoxide metabolism 4 0.03061
34 Interaction with the environment   
 34.01.01.01 homeostasis of metal ions (Na, K, Ca, etc.) 29 0.03479
38 Transposable elements, viral, plasmid protein   
 38.07 proteins necessary for transposon movement 4 0.01412
42 Biogenesis of cellular components   
 42.19 peroxisome 14 0.00119
 42.25 vacuole or lysosome 11 0.02263