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Table 1 Plasmids and Strains

From: Transcriptional profiling reveals molecular basis and novel genetic targets for improved resistance to multiple fermentation inhibitors in Saccharomyces cerevisiae

Plasmids and strains

Description

References

Plasmids

 pRS424

TRP1, a multicopy plasmid

[76]

 pRS425

LEU2, a multicopy plasmid

[76]

 pRS424-WHI2

pRS424 with insert of S288c yeast genomic DNA fragment chrXV: 409,259-412,369 (containing complete sequence of the WHI2 gene)

This study

 pRS424GPD

pRS424 with GPD promoter

[76]

 pRS425GPD

pRS425 with GPD promoter

[76]

 pRS424GPD-WHI2

WHI2 expressed in pRS424GPD

This study

 pRS424GPD-SFP1

SFP1 expressed in pRS424GPD

This study

 pRS424GPD-ACE2

ACE2 expressed in pRS424GPD

This study

 pRS425GPD-SFP1

SFP1 expressed in pRS425GPD

This study

 pRS425GPD-ACE2

ACE2 expressed in Prs425GPD

This study

Strains

 D452-2

MATa, leu2, his3, ura3, can1

[77]

 SR8

D452-2 expressing XYL1, XYL2, and XKS1 through integration, evolutionary engineering in xylose-containing media, and ALD6 deletion

[40]

 SR8-trp

SR8 with TRP1 disrupted

Developed in Dr. Yong-Su Jin lab

 SR8-4

SR8 with TRP1, LEU2, HIS3 and URA3 disrupted

Developed in Dr. Yong-Su Jin lab

 S-C1

SR8-trp harboring pRS424GPD, as a control

This study

 YC1

SR8-trp harboring pRS424-WHI2

This study

 S- SFP1

SR8-trp harboring pRS424GPD- SFP1

This study

 S-ACE2

SR8-trp harboring pRS424GPD- ACE2

This study

S-C2

SR8-4 harboring pRS424GPD and pRS425GPD, as a control

This study

 S-WHI2-c

SR8-4 harboring pRS424GPD-WHI2 and pRS425GPD

This study

 S-WHI2-SFP1

SR8-4 harboring pRS424GPD- WHI2 and pRS425GPD- SFP1

This study

  1. The TDH3 promoter is often referred to as the GPD promoter, which is used in the pRS4XX series of expression vectors [76]
  2. GPD stands for Glyceraldehyde-3-phosphate dehydrogenase, encoded by the TDH3 gene