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Table 3 Gene ontology analysis of transcriptional responses to different stress conditions in S. cerevisiae strain S-C1 (wild-type)

From: Transcriptional profiling reveals molecular basis and novel genetic targets for improved resistance to multiple fermentation inhibitors in Saccharomyces cerevisiae

GO Term

Acetic acid

Furfural

Acetic acid & furfural

Carbohydrate metabolic process (GO:0005975)

YBR001C, YBR105C, YDL055C, YDR050C, YER001W, YFL045C, YFL053W, YGL179C, YGR282C, YJL153C, YJR096W, YKL201C, YLL026W, YLR286C, YLR300W, YOL086C, YOR099W, YPL053C, YPR160W, YPR165W

YEL040W, YFR053C, YGL156W, YGR043C, YGR256W, YJR096W, YLL026W, YLR286C, YML100W, YMR105C, YOR120W, YPR160W

YBR001C, YBR105C, YCR005C, YDL055C, YER001W, YFL053W, YFR053C, YGL156W, YGL179C, YGR043C, YGR256W, YGR279C, YGR282C, YHR104W, YIL045W, YIL107C, YJL153C, YJR096W, YLL026W, YLR286C, YLR300W, YLR342W, YML070W, YML100W, YMR307W, YNL066W, YOR099W, YPL053C

Cellular amino acid metabolic process (GO:0006520)

YBL098W, YDL168W, YDL182W, YDR019C, YDR135C, YDR502C, YER026C, YER043C, YER091C, YGL256W, YGR209C, YIL074C, YJL101C, YJR010W, YJR137C, YJR139C, YKL001C, YKR080W, YLR058C, YLR142W, YLR180W, YLR231C, YLR303W, YMR169C, YMR189W, YMR300C, YNL135C, YNL160W, YOL058W, YOL086C, YOR184 W, YOR375C

YCL030C, YDR007W, YDR502C, YER091C, YGL245W, YGL256W, YJL200C, YJR016C, YLR142W, YMR169C, YMR250W

YCL030C, YCR005C, YDL168W, YDL182W, YDR007W, YDR135C, YDR502C, YDR513W, YEL046C, YER043C, YER091C, YFL030W, YGL009C, YGL256W, YGR209C, YGR267C, YIL074C, YJL101C, YJR010W, YJR137C, YJR139C, YKL001C, YKR080W, YLR058C, YLR142W, YLR180W, YLR303W, YMR169C, YMR189W, YNL160W, YOL064C, YPL091W

Lipid metabolic process (GO:0006629)

YER026C, YER043C, YGL055W, YGR060W, YGR175C, YHR007C, YJL153C, YJL167W, YJR073C, YKL165C, YLR099C, YML008C, YNL111C, YNL169C, YNL231C, YOL151W, YOR086C, YOR317W, YPL028W, YPL095C, YPL117C

YKL150W

YER043C, YJL153C, YKL165C, YLR099C, YNL169C, YNL231C, YOL064C, YOL151W, YPL095C

Nucleobase-containing small molecule metabolic process (GO:0055086)

YBL022C, YBL098W, YCR021C, YDL055C, YDL234C, YDR011W, YDR050C, YDR135C, YDR214W, YDR502C, YER043C, YER070W, YFL045C, YGR209C, YGR281W, YKR080W, YLR043C, YLR180W, YLR231C, YMR120C, YMR300C, YNL112W, YNL220W, YOL086C, YOR128C, YOR153W, YOR184W, YOR328W, YPL036 W, YPL058C

YCR021C, YDR502C, YGR043C, YGR256W, YKL151C, YLR249W, YMR105C, YOR128C, YPL036W

YBL022C, YCR021C, YDL055C, YDR011W, YDR135C, YDR214W, YDR502C, YEL039C, YER043C, YFL037W, YGR043C, YGR209C, YGR256W, YGR281W, YKR080W, YLR180W, YMR120C, YNL220W, YOR153W, YOR328W, YPL058C

Response to chemical (GO:0042221)

YBL022C, YBR008C, YBR101C, YCR021C, YDL020C, YDL124W, YDR011W, YDR135C, YDR533C, YFL053W, YJL101C, YJR096W, YKL178C, YKR071C, YLL026W, YLR043C, YLR109W, YML116W, YNL231C, YOR052C, YOR153W, YOR328W, YPL026C

YCR021C, YDR533C, YFL014W, YGR088W, YJR096W, YKL150W, YLL026W, YMR250W, YOR052C, YOR120W

YBL022C, YBL064C, YBR008C, YCR021C, YDL020C, YDR011W, YDR135C, YDR513W, YDR533C, YEL047C, YFL014W, YFL037W, YFL053W, YGR088W, YHR008C, YHR104W, YJL101C, YJR096W, YKL178C, YKR066C, YKR071C, YLL026W, YML070W, YML116W, YNL231C, YOL052C-A, YOR052C, YOR153W, YOR328W, YPL026C, YPL091W

Response to oxidative stress (GO:0006979)

YBL022C, YCR021C, YDL124W, YDR222W, YDR533C, YJL101C, YJR096W, YKR071C, YLL026W, YLR043C, YLR109W, YLR205C

YCR021C, YDR533C, YFL014W, YGR088W, YJR096W, YKL150W, YLL026W, YMR250W, YOR120W

YBL022C, YBL064C, YCR021C, YDR222W, YDR513W, YDR533C, YFL014W, YGR088W, YHR008C, YHR104W, YJL101C, YJR096W, YKR066C, YKR071C, YLL026W, YLR205C, YOL052C-A, YPL091W

Transmembrane transport (GO:0055085)

YAL053W, YBR008C, YBR054W, YCL025C, YCR021C, YDR011W, YDR135C, YDR345C, YER060W, YGL255W, YGR065C, YGR138C, YGR260W, YGR281W, YHL036W, YHR092C, YHR096C, YKL175W, YKR039W, YLL028W, YLR130C, YLR237W, YML116W, YOL119C, YOR153W, YOR306C, YOR328W, YPL036W, YPL058C, YPL274W

YBR054W, YCL025C, YCR021C, YDR345C, YER103W, YGR138C, YHR094C, YHR096C, YPL036W

YBL075C, YBR008C, YBR054W, YBR069C, YCR021C, YDR011W, YDR046C, YDR135C, YDR345C, YDR497C, YER103W, YFL054C, YGL255W, YGR138C, YGR281W, YHR092C, YHR096C, YJR095W, YKL175W, YLL028W, YLR237W, YLR259C, YML116W, YOR153W, YOR328W, YPL058C, YPL274W, YPR138C, YPR156C

Ion transport (GO: 0006811)

YAL053W, YBR054W, YCL025C, YCR021C, YDR135C, YGL255W, YGR065C, YGR138C, YGR142W, YGR260W, YHL036W, YKL165C, YKL175W, YKR039W, YLL028W, YLR130C, YLR214W, YML116W, YNL231C, YOR306C, YOR317W, YPL036W, YPL274W

YBR054W, YCL025C, YCR021C, YGR138C, YPL036W

YBR054W, YBR069C, YCR021C, YDR046C, YDR135C, YGL255W, YGR138C, YGR142W, YHR162W, YJR095W, YKL165C, YKL175W, YLL028W, YML116W, YMR266W, YNL231C, YPL274W, YPR138C, YPR156C

  1. The genes marked in italics indicate the common genes regulated in the same bioprocess (GO Term) under different stress conditions