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Table 2 Predicted CAZymes and other potential lignocellulolytic enzymes in the P. ananatis Sd-1 genome

From: Genomic and secretomic insight into lignocellulolytic system of an endophytic bacterium Pantoea ananatis Sd-1

Enzymes

Specific activity

Locus tag

CAZy modules

Signal peptides

Cellulose and hemicellulose degradation relevant enzymes

Endoglucanases

Y903_RS0123720

GH8

Y

Exoglucanases

Y903_RS0108720

GH10

Y

β-glucosidases

Y903_RS0109910

GH1

N

Y903_RS0123340

GH1

Y

Y903_RS0115000

GH1

N

Y903_RS0103625

GH1

N

Y903_RS0104945

GH1

N

Y903_RS0106975

GH1

N

Y903_RS0113180

GH3

Y

Y903_RS0116520

GH3

N

Oxidoreductase

Y903_RS0100765

GH109

N

Y903_RS0119930

GH109

N

Y903_RS0103245

GH109

N

Y903_RS0108420

GH109

N

α-N-arabinofuranosidase

Y903_RS0119145

GH43

N

Y903_RS0120675

GH51

N

α-mannosidase

Y903_RS0105780

GH38

N

Galactosidase

Y903_RS0108500

GH2

N

Y903_RS0110160

GH4

N

Esterase

Y903_RS0100380

CE1

N

Y903_RS0104455

CE10

Y

Y903_RS0104990

CE16

N

Y903_RS0120815

CE10

Y

Y903_RS0117780

CE10

Y

Acyl-CoA esterase

Y903_RS0113655

CE1

N

Acyl-CoA thioesterase

Y903_RS0114420

CE3

N

Carboxylesterase

Y903_RS0117855

CE1

N

Y903_RS0116340

CE10

N

Lignin degradation relevant enzymes

Multicopper oxidase

Y903_RS0111680

–

Y

Y903_RS0119240

–

Y

Catalase/hydroperoxidase

Y903_RS0115335

AA2

N

GMC family oxidoreductase

Y903_RS0107765

AA3

N

Quinone oxidoreductase

Y903_RS0112360

–

N

Y903_RS0117910

–

N

Y903_RS0118595

–

N

Y903_RS0110255

–

N

Y903_RS0120835

–

N

Y903_RS0120850

–

N

Y903_RS0120855

–

N

Y903_RS0120880

–

N

Y903_RS0105425

–

N

Y903_RS0107980

–

N

Glutathione S-transferase

Y903_RS0123560

–

N

Y903_RS0108490

–

N

Y903_RS0107875

–

N

Y903_RS0120970

–

N