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Fig. 4 | Biotechnology for Biofuels

Fig. 4

From: Metagenomic analysis of microbial consortia enriched from compost: new insights into the role of Actinobacteria in lignocellulose decomposition

Fig. 4

An overview of microbial degradation of cellulose and hemicellulose in the RSA consortia. We show the dominant species that digest the cellulose and hemicellulose by depicting the distribution of genes encoding the CAZymes in the RSA consortia. The purple, pink, green, blue, yellow, gray and brown circles represent the members of phylum Actinobacteria, Firmicutes, Proteobacteria, Bacteroidetes, Chloroflexi, Gemmatimonadetes and Crenarchaeota, respectively. The diameter of each circle is proportional to its relative abundance. A. arabaticum, Acetohalobium arabaticum; A. mediterranei, Amycolatopsis mediterranei; A. missouriensis, Actinoplanes missouriensis; A. vinelandii, Azotobacter vinelandii; B. cellulosilyticus, Bacteroides cellulosilyticus; B. cavernae, Beutenbergia cavernae; C. aerophila, Caldilinea aerophila; C. proteoclasticum, Clostridium proteoclasticum; C. flavigena, Cellulomonas flavigena; C. necator, Cupriavidus necator; C. woesei, Conexibacter woesei; D. alkaliphilus, Dethiobacter alkaliphilus; G. aurantiaca, Gemmatimonas aurantiaca; H. aurantiacus, Herpetosiphon aurantiacus; H. orenii, Halothermothrix orenii; K. flavida, Kribbella flavida; M. aurantiaca, Micromonospora aurantiaca; M. australiensis, Mahella australiensis; M. hydrocarbonoclasticus, Marinobacter hydrocarbonoclasticus; M. lupini, Micromonospora lupini; N. hollandicus, Nitrolancetus hollandicus; P. heparinus, Pedobacter heparinus; P. piscicida, Pseudoalteromonas piscicida; P. dioxanivorans, Pseudonocardia dioxanivorans; P. elgii, Paenibacillu elgii; P. maris, Planctomyces maris; P. mucilaginosus, Paenibacillus mucilaginosus; P. suwonensis, Pseudoxanthomonas suwonensis; R. marinus, Rhodothermus marinus; S. bingchenggensis, Streptomyces bingchenggensis; S. clavuligerus, Streptomyces clavuligerus; S. hellenicus, Staphylothermus hellenicus; S. himastatinicus, Streptomyces himastatinicus; S. linguale, Spirosoma linguale; S. nassauensis, Stackebrandtia nassauensis; S. roseum, Streptosporangium roseum; S. scabiei, Streptomyces scabiei; S. thermophilus, Sphaerobacter thermophilus; T. acetatoxydans, Tepidanaerobacter acetatoxydans; T. curvata, Thermomonospora curvata; T. terrenum, Thermobaculum terrenum; T. turnerae, Teredinibacter turnerae; T. bispora, Thermobispora bispora; T. composti, Thermobacillus composti; T. mathranii, Thermoanaerobacter mathranii; T. potens, Thermincola potens; T. thermosaccharolyticum, Thermoanaerobacterium thermosaccharolyticum; V. maris, Verrucosispora maris. The bubble plot indicates the relative abundances of each microbial species in the RSA consortia

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