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Table 5 Summary of hemicellulose-degrading proteins identified in the secretomes of four fungi

From: Comparative analysis of the secretomes of Schizophyllum commune and other wood-decay basidiomycetes during solid-state fermentation reveals its unique lignocellulose-degrading enzyme system

Species

Accession no.a

Familyb

Predicted proteina

Upc

SignalPd

S. commune

Main chain

 Schco3|2357273

GH2

β-mannosidase

2

Y

 Schco3|2174600

GH2

β-mannosidase

18

Y

 Schco3|2573073

GH10

β-1,4-xylanase

4

N

 Schco3|2252725

GH10

β-1,4-xylanase

2

Y

 Schco3|2599608

GH10, CBM1

β-1,4-xylanase

12

Y

 Schco3|2170032

GH11

endo-1,4-β-xylanase A

7

Y

 Schco3|103086

GH43

β-xylosidase

2

Y

 Schco3|2147860

GH74

xyloglucanase

5

Y

Side group

 Schco3|2159785

GH27

α-galactosidase

7

N

 Schco3|2310213

GH31

α-xylosidase

1

Y

 Schco3|2304995

GH35

β-galactosidase

15

Y

 Schco3|2669535

GH35

β-galactosidase

1

Y

 Schco3|110618

GH35

β-galactosidase

1

Y

 Schco3|2138893

GH35

β-galactosidase

13

Y

 Schco3|13761

GH35

β-galactosidase

5

N

 Schco3|2347041

GH43

α-l-arabinofuranosidase

9

Y

 Schco3|15661

GH43

α-l-arabinofuranosidase

4

N

 Schco3|2226774

GH43

α-l-arabinofuranosidase

3

N

 Schco3|2085606

GH51

α-l-arabinofuranosidase

3

N

 Schco3|108819

GH51, CBM4

α-l-arabinofuranosidase

4

Y

 Schco3|2167580

GH62

α-l-arabinofuranosidase

5

Y

 Schco3|1339154

GH115

α-glucuronidase

8

Y

 Schco3|2275054

CE1

acetyl xylan esterase

3

Y

 Schco3|2061511

CE1, CBM1

acetyl xylan esterase

2

N

 Schco3|2061509

CE1, CBM1

acetyl xylan esterase

2

Y

 Schco3|1161522

CE1, CBM17

feruloyl esterase

4

Y

 Schco3|2151545

CE1

esterase

2

N

 Schco3|2138510

CE15

glucuronoyl esterase

6

Y

P. chrysosporium

Main chain

 Phchr2|1969118

GH3

β-xylosidase

5

Y

 Phchr2|2686185

GH5, CBM1

endo-1,4-β-mannanase

2

Y

 Phchr2|2972357

GH5, CBM1

endo-1,4-β-mannanase

2

Y

 Phchr2|2970250

GH10

endo-β-1,4-xylanase

6

Y

 Phchr2|138715

GH10, CBM1

endo-1,4-β-xylanase C

1

Y

 Phchr2|2970992

GH10, CBM1

endo-1,4-β-xylanase

4

Y

 Phchr2|134556

GH74, CBM1

oligoxyloglucan cellobiohydrolase

8

Y

Side group

 Phchr2|125033

GH27

α-galactosidase

5

Y

 Phchr2|2973689

GH43, CBM35

galactan 1,3-β-galactosidase

2

Y

 Phchr2|2305691

GH51, CBM4

α-l-arabinofuranosidase

4

N

 Phchr2|126075

CE1, CBM1

acetyl xylan esterase

1

Y

C. subvermispora

Main chain

 Cersu1|107994

GH2

β-mannosidase

5

Y

 Cersu1|103229

GH2

β-mannosidase

2

N

 Cersu1|157432

GH10

endo-1,4-β-xylanase

5

Y

 Cersu1|116326

GH10

endo-1,4-β-xylanase A

4

Y

 Cersu1|67561

GH10, CBM1

endo-1,4-β-xylanase A

3

Y

Side group

 Cersu1|102094

GH27

α-galactosidase

4

N

 Cersu1|124631

GH27

α-galactosidase

2

Y

 Cersu1|110070

GH35

β-galactosidase

18

Y

 Cersu1|99896

GH51

α-l-arabinofuranosidase A

4

Y

 Cersu1|106199

GH95

α-l-fucosidase

3

Y

 Cersu1|106142

CE1, CBM1

acetyl xylan esterase

2

Y

G. trabeum

Main chain

 Glotr1_1|115191

GH2

β-mannosidase

13

Y

 Glotr1_1|122002

GH3

β-xylosidase

16

Y

 Glotr1_1|114574

GH5

endo-β-mannanase

10

Y

 Glotr1_1|46499

GH10

endo-1,4-β-xylanase

19

N

 Glotr1_1|138785

GH10

β-1,4-xylanase

5

Y

 Glotr1_1|140289

GH10, CBM1

endo-1,4-β-xylanase

12

Y

 Glotr1_1|68887

GH74

oligoxyloglucan cellobiohydrolase

21

Y

Side group

 Glotr1_1|81012

GH1

β-galactosidase-like protein

23

Y

 Glotr1_1|117566

GH27

α-galactosidase

12

Y

 Glotr1_1|61165

GH29

α-l-fucosidase

10

N

 Glotr1_1|141329

GH31

α-xylosidase

29

Y

 Glotr1_1|119185

GH31

α-xylosidase

19

Y

 Glotr1_1|81512

GH35

β-galactosidase

24

N

 Glotr1_1|111095

GH35

β-galactosidase

37

Y

 Glotr1_1|69366

GH43, CBM6

galactan 1,3-β-galactosidase

10

Y

 Glotr1_1|134804

GH51

α-l-arabinofuranosidase

14

Y

 Glotr1_1|111463

GH51, CBM4

α-l-arabinofuranosidase

12

Y

 Glotr1_1|121308

GH115

α-glucuronidase

24

Y

 Glotr1_1|117128

CE1

acetyl xylan esterase

10

Y

 Glotr1_1|46545

CE15

glucuronoyl esterase

7

Y

  1. a Accession numbers and predicted proteins were obtained from the corresponding Joint Genome Institute (JGI) databases
  2. b Family information was obtained from the carbohydrate-active enzyme database (CAZy)
  3. c Unique peptides
  4. d Prediction of signal peptides was based on SignalP analysis