Skip to main content

Table 1 Summary statistics of the sequencing reads and the corresponding assemblies

From: Dissection of early transcriptional responses to water stress in Arundo donax L. by unigene-based RNA-seq

Assemblya Summary statistics
Total trinity transcripts 111,749
Total trinity components 45,821
Contig N50 (bp) 1826
MIRA unigenes 80,355
Total length of sequence (bp) 75,960,964
Unigene N50 (bp) 1570
GC  % 47.70 
  1. Summary statistics of A. donax whole drought transcriptome obtained by Trinity and MIRA.
  2. aTrinity assembly: K 25, Kmer coverage 5