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Table 1 Summary statistics of the sequencing reads and the corresponding assemblies

From: Dissection of early transcriptional responses to water stress in Arundo donax L. by unigene-based RNA-seq

Assemblya

Summary statistics

Total trinity transcripts

111,749

Total trinity components

45,821

Contig N50 (bp)

1826

MIRA unigenes

80,355

Total length of sequence (bp)

75,960,964

Unigene N50 (bp)

1570

GC  %

47.70 

  1. Summary statistics of A. donax whole drought transcriptome obtained by Trinity and MIRA.
  2. aTrinity assembly: K 25, Kmer coverage 5