Fig. 5

Mean expression values of CAZymes in T. reesei clusters during incubation on different carbon sources. a Mean expression value, calculated from the log hybridization intensity (for oligonucleotide arrays); b Mean expression value calculated from RPKM (kilobase of exon per million mapped sequence reads) of RNA deep sequencing (asterisk); c “Fold” increase of expression on cellulose (left bar) and lactose (right bar) relative to glucose. The expressions of the genes encoding cel7A, cel6A (both CEC) and cel7B (MCC) were omitted from the calculation as their expression and induction values were >100-fold higher than those of the other genes and corrupted the calculations and statistics