Natural diversity of cellulases, xylanases, and chitinases in bacteria

Table 1 Distribution of identified GH domains and multi-activity GHs (i.e., MA-GHs) in sequenced bacterial genomes

GH	PFAM	Sub.	#DOM.	#Prot.	CAZy	MA-GHs (2nd GH domain)											Figure
GH	PFAM	Sub.	#DOM.	#Prot.	CAZy	5	6	8	9	10	11	12	18	19	44	48	Figure
5	PF00150	Cel.	7908	7885	4907	23	3		2	2	7	41	5		3		Additional file 2: Figure S1
6	PF01341	Cel.	3088	3087	534	3	1		3			1					Additional file 3: Figure S2
8	PF01270	Cel.	5003	5003	1738								1				Additional file 4: Figure S3
9	PF00759	Cel.	2307	2306	878	2	3		1						8	12	Additional file 5: Figure S4
10	PF00331	Xyl.	2541	2535	1579	2				6	20					2	Additional file 6: Figure S5
11	PF00457	Xyl.	534	507	586	7				20	22						Additional file 7: Figure S6
12	PF01670	Cel.	2515	2515	368	41	1										Additional file 8: Figure S7
18	PF00704	Chi.	12,771	12,715	5929	5		1					51	2			Additional file 9: Figure S8
19	PF00182	Chi.	1683	1683	1989								2				Additional file 10: Figure S9
30	PF02055	Xyl.	1361	1361	933
44	PF12891	Cel.	143	143	104	3			8								Additional file 11: Figure S10
45	PF02015	Cel.	31	31	18
48	PF02011	Cel.	346	345	724				12	2						1	Additional file 12: Figure S11
85	PF03644	Chi.	941	941	246

Sub. substrate targeted by the GH domain, Cel. cellulose, Xyl xylan, and Chi. chitin. #DOM. number of identified domain and #Prot. number of proteins identified in this study, CAZy number of identified domain in bacteria according to the CAZy database (http://www.cazy.org, as of March 2016)
Homo-GHs are in italics

ISSN: 2731-3654