Table 6 Enrichment of metabolic pathway is flux clusters
From: Genome wide analysis of protein production load in Trichoderma reesei
Pathway ID | Pathway name | Cluster | Count of ECs | p value |
|---|---|---|---|---|
LYSINE-AMINOAD-PWY | Lysine biosynthesis IV | 1 | 4 | 0.0000582 |
PWY-3081 | Lysine biosynthesis V | 1 | 4 | 0.0000582 |
ARO-PWY | Chorismate biosynthesis I | 2 | 6 | 0.0004460 |
HISTSYN-PWY | Histidine biosynthesis | 2 | 7 | 0.0007221 |
PWY-6163 | Chorismate biosynthesis from 3-dehydroquinate | 2 | 4 | 0.0062252 |
PWY-6123 | Inosine-5-phosphate biosynthesis I IMP biosynthesis I PWY-6124 inosine-5-phosphate biosynthesis II | 2 | 3 | 0.0226875 |
PWY-6124 | Inosine-5’-phosphate biosynthesis II | 2 | 3 | 0.0226875 |
TRPSYN-PWY | Tryptophan biosynthesis | 2 | 3 | 0.0226875 |
rn00400 | Phenylalanine, tyrosine and tryptophan biosynthesis | 2 | 11 | 0.0428314 |
PWY-6519 | 7-keto-8-aminopelargonate biosynthesis I | 5 | 7 | 0.00000008 |
PWY-6282 | Palmitoleate biosynthesis I | 5 | 4 | 0.0005743 |
FASYN-ELONG-PWY | Fatty acid elongation-saturated | 5 | 3 | 0.0012710 |
PWY0-862 | (5Z)-dodec-5-enoate biosynthesis | 5 | 3 | 0.0012710 |
PWYG-321 | Mycolate biosynthesis | 5 | 3 | 0.0012710 |
PWY-5989 | Stearate biosynthesis II (bacteria and plants) | 5 | 3 | 0.0047122 |
PWY-5971 | Palmitate biosynthesis II (bacteria and plants) | 5 | 3 | 0.0109189 |
PWY-5994 | Palmitate biosynthesis | 5 | 3 | 0.0109189 |
GO:0004312 | Fatty acid synthase activity | 5 | 3 | 0.0328365 |
HOMOSERSYN-PWY | Homoserine biosynthesis | 8 | 3 | 0.0093657 |
SUCSYN-PWY | Sucrose biosynthesis I | 8 | 3 | 0.0318091 |
PWY-5901 | 2,3-dihydroxybenzoate biosynthesis | 9 | 3 | 0.0000052 |
rn01053 | Biosynthesis of siderophore group nonribosomal peptides | 9 | 3 | 0.0000052 |
rn00364 | Fluorobenzoate degradation | 12 | 3 | 0.0007013 |
rn00361 | Chlorocyclohexane and chlorobenzene degradation | 12 | 3 | 0.0034159 |
rn00627 | Aminobenzoate degradation | 12 | 3 | 0.0034159 |
rn00270 | Cysteine and methionine metabolism | 13 | 7 | 0.004274 |
ARGSYNBSUB-PWY | Arginine biosynthesis II (acetyl cycle) | 14 | 4 | 0.0000001 |
GLUTORN-PWY | Ornithine biosynthesis | 14 | 3 | 0.0000052 |
PWY-5154 | Arginine biosynthesis III | 14 | 3 | 0.0000208 |
rn00330 | Arginine and proline metabolism | 14 | 4 | 0.0190572 |