Skip to main content

Table 4 GO classification for the differentially expressed genes, DEGs, involved in lipid biosynthesis-related functional categories during Camelina seed development with emphasis on the transcripts playing roles in fatty-acid and triacylglycerol biosynthesis/degradation

From: Transcriptome profiling of Camelina sativa to identify genes involved in triacylglycerol biosynthesis and accumulation in the developing seeds

GO classification (terms) Term (accession) Number of transcripts
Cs-14 (10–15 DAF) Cs-21 (16–21 DAF)
Transferase activity, transferring acyl groups GO:0016746 51 76
2-acylglycerol O-acyltransferase activity GO:0003846 1
Acylglycerol O-acyltransferase activity GO:0016411 1 9
Diacylglycerol O-acyltransferase activity GO:0004144 1 8
Glycerol-3-phosphate O-acyltransferase activity GO:0004366 2
Glycerol-3-phosphate 2-O-acyltransferase activity GO:0090447 12
Long-chain-alcohol O-fatty-acyltransferase activity GO:0047196 1
O-acyltransferase activity GO:0008374 6 23
Lipase activity GO:0016298 17 35
Acyl-CoA hydrolase activity GO:0047617 2
Acylglycerol lipase activity GO:0047372 1
Fatty-acid ligase activity GO:0015645 2 5
Long-chain fatty-acid ligase activity GO:0008922 2 5
Phospholipase activity GO:0004620 4 15
Phospholipase C activity GO:0004629 2 5
Phospholipase D activity GO:0004630 1 4
Triglyceride lipase activity GO:0004806 10 11
Very long-chain fatty-acid-CoA ligase activity GO:0031957 3
Lipid binding GO:0008289 42 43
Phospholipid binding GO:0005543 15 6
Diacylglycerol kinase activity GO:0004143 3 1
Fatty-acid elongase activity GO:0009922 2 4
Fatty-acid synthase activity GO:0004312 2 5
Fatty-acid transporter activity GO:0015245 2 1
Fatty-acyl-CoA reductase (alcohol-forming) activity GO:0080019 1 4
Long-chain-fatty-acyl-CoA reductase activity GO:0050062 1 4
Phosphatidylcholine 1-acylhydrolase activity GO:0008970 1 2
Lipid transporter activity GO:0005319 9 4
Phospholipid transporter activity GO:0005548 6 1
  1. The Gene ontologies GO classification of the selected protein families involved in lipid biosynthesis is shown with the number of transcripts belongs to each functional category during Camelina seed development is presented. Cs-14 represents the early stage of seed development at 10–15 DAF days after flowering, while Cs-21 represents the late stages of seed development at 16–21 DAF