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Table 4 GO classification for the differentially expressed genes, DEGs, involved in lipid biosynthesis-related functional categories during Camelina seed development with emphasis on the transcripts playing roles in fatty-acid and triacylglycerol biosynthesis/degradation

From: Transcriptome profiling of Camelina sativa to identify genes involved in triacylglycerol biosynthesis and accumulation in the developing seeds

GO classification (terms)

Term (accession)

Number of transcripts

Cs-14 (10–15 DAF)

Cs-21 (16–21 DAF)

Transferase activity, transferring acyl groups

GO:0016746

51

76

2-acylglycerol O-acyltransferase activity

GO:0003846

–

1

Acylglycerol O-acyltransferase activity

GO:0016411

1

9

Diacylglycerol O-acyltransferase activity

GO:0004144

1

8

Glycerol-3-phosphate O-acyltransferase activity

GO:0004366

2

–

Glycerol-3-phosphate 2-O-acyltransferase activity

GO:0090447

–

12

Long-chain-alcohol O-fatty-acyltransferase activity

GO:0047196

–

1

O-acyltransferase activity

GO:0008374

6

23

Lipase activity

GO:0016298

17

35

Acyl-CoA hydrolase activity

GO:0047617

–

2

Acylglycerol lipase activity

GO:0047372

–

1

Fatty-acid ligase activity

GO:0015645

2

5

Long-chain fatty-acid ligase activity

GO:0008922

2

5

Phospholipase activity

GO:0004620

4

15

Phospholipase C activity

GO:0004629

2

5

Phospholipase D activity

GO:0004630

1

4

Triglyceride lipase activity

GO:0004806

10

11

Very long-chain fatty-acid-CoA ligase activity

GO:0031957

–

3

Lipid binding

GO:0008289

42

43

Phospholipid binding

GO:0005543

15

6

Diacylglycerol kinase activity

GO:0004143

3

1

Fatty-acid elongase activity

GO:0009922

2

4

Fatty-acid synthase activity

GO:0004312

2

5

Fatty-acid transporter activity

GO:0015245

2

1

Fatty-acyl-CoA reductase (alcohol-forming) activity

GO:0080019

1

4

Long-chain-fatty-acyl-CoA reductase activity

GO:0050062

1

4

Phosphatidylcholine 1-acylhydrolase activity

GO:0008970

1

2

Lipid transporter activity

GO:0005319

9

4

Phospholipid transporter activity

GO:0005548

6

1

  1. The Gene ontologies GO classification of the selected protein families involved in lipid biosynthesis is shown with the number of transcripts belongs to each functional category during Camelina seed development is presented. Cs-14 represents the early stage of seed development at 10–15 DAF days after flowering, while Cs-21 represents the late stages of seed development at 16–21 DAF