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Table 1 Summary of the GO terms over-represented in the lists of gene up () or down () regulated post transfer from fructose to SEB for 6 h

From: RNAseq reveals hydrophobins that are involved in the adaptation of Aspergillus nidulans to lignocellulose

GO term

Description

p value

Class

Reg.

Alternative carbon usage and autophagy

 GO:0019439

Aromatic compound catabolic process

0.002559

BP

 GO:0009083

Branched chain family amino acid catabolic process

0.000445

BP

 GO:0033539

Fatty acid beta-oxidation using acyl-CoA dehydrogenase

0.004303

BP

 GO:0045493

Xylan catabolic process

0.004047

BP

 GO:0044247

Cellular polysaccharide catabolic process

0.001386

BP

 GO:0004553

Hydrolase activity, hydrolyzing O-glycosyl compounds

0.000516

MF

 GO:0034727

Piecemeal microautophagy of nucleus

3.8E−05

BP

 GO:0000407

Pre-autophagosomal structure

0.004047

CC

Sporulation

 GO:0043938

Positive regulation of sporulation

0.000876

BP

 GO:2000243

Positive regulation of reproductive process

0.004954

BP

 GO:0045597

Positive regulation of cell differentiation

0.003258

BP

 GO:0034305

Regulation of asexual sporulation

0.00405

BP

 GO:0048315

Conidium formation

0.001015

BP

 GO:0019953

Sexual reproduction

0.005001

BP

Signal transduction and transcriptional regulation

 GO:0045859

Regulation of protein kinase activity

0.002559

BP

 GO:0004672

Protein kinase activity

4.65E−05

MF

 GO:0006355

Regulation of transcription, DNA-dependent

0.000713

BP

 GO:0005667

Transcription factor complex

0.005477

CC

 GO:0030528

Transcription regulator activity

1.47E−06

MF

 GO:0003700

Sequence-specific DNA binding transcription factor activity

1.39E−05

MF

 GO:0000077

DNA damage checkpoint

0.000601

BP

 GO:0042770

Signal transduction in response to DNA damage

0.000232

BP

Protein translation

 GO:0000027

Ribosomal large subunit assembly

1.43E−08

BP

 GO:0005763

Mitochondrial small ribosomal subunit

1.35E−05

CC

 GO:0030687

Preribosome, large subunit precursor

4.87E−07

CC

 GO:0022627

Cytosolic small ribosomal subunit

2.89E−06

CC

 GO:0022625

Cytosolic large ribosomal subunit

4.15E−05

CC

 GO:0003735

Structural constituent of ribosome

5.37E−25

MF

GO:0043614

Multi-eIF complex

0.004466

CC

Respiration

 GO:0006096

Glycolysis

0.00425

BP

 GO:0015986

ATP synthesis coupled proton transport

0.00231

BP

 GO:0033617

Mitochondrial respiratory chain complex IV assembly

0.004466

BP

 GO:0042775

Mitochondrial ATP synthesis coupled electron transport

0.006022

BP

 GO:0033615

Mitochondrial proton-transporting ATP synthase complex assembly

0.001028

BP

 GO:0000275

Mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)

0.004077

CC

 GO:0005751

Mitochondrial respiratory chain complex IV

0.0135

CC

 GO:0045254

Pyruvate dehydrogenase complex

0.004077

CC

 GO:0016491

Oxidoreductase activity

2.57E−06

MF

  1. For the full list refer to Additional file 6: File S2
  2. BP, MF, and CC denote biological process, molecular function, and cellular component, respectively