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Table 2 Summary of the GO terms over-represented in the lists of gene up () or down () regulated post transfer from fructose to SEB for 12 h

From: RNAseq reveals hydrophobins that are involved in the adaptation of Aspergillus nidulans to lignocellulose

GO term

Description

p-value

Class

Reg.

Alternative carbon usage and autophagy

 GO:0034727

Piecemeal microautophagy of nucleus

0.00092

BP

 GO:0033539

Fatty acid beta-oxidation using acyl-CoA dehydrogenase

0.002012

BP

 GO:0009083

Branched chain family amino acid catabolic process

0.000123

BP

 GO:0019439

Aromatic compound catabolic process

0.00059

BP

Sporulation

 GO:0043941

Positive regulation of sexual sporulation resulting in formation of a cellular spore

0.001234

BP

 GO:0075307

Positive regulation of conidium formation

0.002775

BP

Signal transduction and transcriptional regulation

 GO:0031667

Response to nutrient levels

0.001154

BP

 GO:0005667

Transcription factor complex

0.002173

CC

 GO:0044212

Transcription regulatory region DNA binding

5.56E−05

MF

 GO:0010843

Promoter binding

5.56E−05

MF

 GO:0030528

Transcription regulator activity

4.54E−09

MF

 GO:0003700

Sequence-specific DNA binding transcription factor activity

6.17E−07

MF

 GO:0006468

Protein phosphorylation

0.002164

BP

 GO:0004674

Protein serine/threonine kinase activity

0.000797

MF

 GO:0042770

Signal transduction in response to DNA damage

0.00092

BP

 GO:0000077

DNA damage checkpoint

0.002455

BP

Protein translation

 GO:0000028

Ribosomal small subunit assembly

0.002859

BP

 GO:0000027

Ribosomal large subunit assembly

9.06E−07

BP

 GO:0005763

Mitochondrial small ribosomal subunit

4.47E−05

CC

 GO:0022627

Cytosolic small ribosomal subunit

2.43E−06

CC

 GO:0022625

Cytosolic large ribosomal subunit

0.000133

CC

 GO:0005762

Mitochondrial large ribosomal subunit

6E−08

CC

 GO:0003735

Structural constituent of ribosome

9.5E−25

MF

Respiration

 GO:0006007

Glucose catabolic process

0.000946

BP

 GO:0006099

Tricarboxylic acid cycle

0.004933

BP

 GO:0006119

Oxidative phosphorylation

0.000164

BP

 GO:0016491

Oxidoreductase activity

4.81E−05

MF

 GO:0045254

Pyruvate dehydrogenase complex

0.006285

CC

 GO:0015986

ATP synthesis coupled proton transport

0.005186

BP

 GO:0033617

Mitochondrial respiratory chain complex IV assembly

0.008028

BP

 GO:0005746

Mitochondrial respiratory chain

0.00779

CC

 GO:0000275

Mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)

0.006285

CC

  1. For the full list refer to Additional file 7: File S3
  2. BP, MF, and CC denote biological process, molecular function, and cellular component, respectively