Mapping N-linked glycosylation of carbohydrate-active enzymes in the secretome of Aspergillus nidulans grown on lignocellulose

Table 2 Motifs report for the flanking sequences dataset of N-glycosylated sites

Motif	Dataset matches^a	Dataset percentage^b	Background percentage^c
……n.S….	42	27.8	6.60
……n.T….	109	72.2	7.30
……nGT…	19	12.6	1.50
……nTT….	12	7.90	0.92
……nST….	14	9.30	0.69
……n.T.T..	15	9.90	0.96
…P..n.T….	15	9.90	0.80
T…..n.T….	14	9.30	0.92

S serine, T threonine, P proline
^aThe data set consists of the flanking sequences for N-glycosylated sites
^bDataset percentage was calculated based on the probability that a modification occurs in a given motif throughout all identified peptides
^cBackground percentage was calculated using all proteins loaded into the program as background and measuring the probability that a specific amino acid appears with a motif. The dots correspond to the amino acids flanking glycosylated asparagines (n)

ISSN: 2731-3654