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Table 2 Motifs report for the flanking sequences dataset of N-glycosylated sites

From: Mapping N-linked glycosylation of carbohydrate-active enzymes in the secretome of Aspergillus nidulans grown on lignocellulose

Motif Dataset matchesa Dataset percentageb Background percentagec
……n.S…. 42 27.8 6.60
……n.T…. 109 72.2 7.30
……nGT… 19 12.6 1.50
……nTT…. 12 7.90 0.92
……nST…. 14 9.30 0.69
……n.T.T.. 15 9.90 0.96
…P..n.T…. 15 9.90 0.80
T…..n.T…. 14 9.30 0.92
  1. S serine, T threonine, P proline
  2. aThe data set consists of the flanking sequences for N-glycosylated sites
  3. bDataset percentage was calculated based on the probability that a modification occurs in a given motif throughout all identified peptides
  4. cBackground percentage was calculated using all proteins loaded into the program as background and measuring the probability that a specific amino acid appears with a motif. The dots correspond to the amino acids flanking glycosylated asparagines (n)