Trait | Model I | Model II | Model III | Model IV | Model V | Model VI |
---|
EB-11 | 925 | 0 | 27 | 0a
| 0 | 0 |
Height-11 | 600 | 1 | 6 | 1 | 1a
| 0 |
EB-12 | 1492 | 0 | 56 | 0 | 0a
| 0 |
Height-12 | 1385 | 0 | 26 | 0 | 0a
| 0 |
EB-13 | 1750 | 0 | 17 | 0 | 0a
| 0 |
Height-13 | 1517 | 1 | 8 | 1 | 1a
| 1 |
BA-13 | 1690 | 0 | 21 | 0 | 0a
| 0 |
SC-13 | 334 | 0 | 8 | 0a
| 0 | 0 |
LA-13 | 2803 | 1 | 162 | 2 | 0a
| 0 |
SLA-13 | 157 | 0a
| 42 | 0 | 0 | 0 |
CA-13 | 321 | 0 | 0a
| 0 | 0 | 0 |
CNPL-13 | 2908 | 2 | 146 | 3 | 1a
| 0 |
SD-13 | 705 | 0a
| 10 | 0 | 0 | 0 |
SI-13 | 99 | 0a
| 18 | 0 | 0 | 0 |
SP-12 | 1 | 0 | 1 | 0a
| 0 | 0 |
- Number of significant trait-SNP associations at α < 8.79 × 10−6 under 6 possible models: (1) simple GLM (no genetic structure correction); (2) GLM with seven significant principal components of neutral genetic variation; (3) GLM with Q-matrix (K = 2) from STRUCTURE; (4) MLM with EMMA kinship matrix; (5) MLM with EMMA kinship and Q-matrix; (6) MLM with EMMA kinship and significant principal components of genetic variation. aIndicates the optimal model selected by comparison of log-likelihoods using BIC