Trait | SNP | Chromosome | Position (bp) | p value | Candidate gene | Additional information |
---|---|---|---|---|---|---|
EB-11 | SNP_IGA_6_17929363 | 6 | 17,822,770 | 9.55E−05 | POPTR_0006s18990 | CNGC17; ATCNGC17; calmodulin binding/cyclic nucleotide binding/ion channel |
Height-11 | SNP_IGA_7_12319871 | 7 | 12,250,804 | 6.46E−06 | POPTR_0007s11900 | Unknown protein a |
Height-11 | SNP_IGA_6_18338146 | 6 | 18,228,999 | 1.30E−05 | POPTR_0006s19240 | GAE1; UDP-glucuronate 4-epimerase/catalytic+ |
Height-11 | SNP_IGA_15_11900175 | 15 | 11,834,554 | 1.44E−04 | POPTR_0015s11190 | Unknown protein |
EB-12 | SNP_IGA_6_8443540 | 6 | 8,388,882 | 9.47E−05 | POPTR_0006s11060 | ATH9 (thioredoxin H-type 9) |
EB-12 | SNP_IGA_7_993475 | 7 | 987,055 | 1.54E−04 | POPTR_0007s01700 | GLX2-4 (glyoxalase 2-4); hydrolase/hydroxyacylglutathione hydrolase/zinc ion binding |
Height-12 | SNP_IGA_7_12319871 | 7 | 12,250,804 | 4.70E−05 | POPTR_0007s11900 | Unknown protein# |
Height-13 | PnCOL2_703 | 4 | 9,357,150 | 3.16E−06 | POPTR_0004s10800 | COL2 (constans-like 2); transcription factor/zinc ion binding a |
SC-13 | SNP_IGA_1_44937224 | 1 | 44,670,745 | 1.05E−04 | POPTR_0001s44200 | ATK3 (ARABIDOPSIS THALIANA KINESIN 3); ATPase/microtubule binding/microtubule motor |
SC-13 | SNP_IGA_6_7875360 | 6 | 7,824,407 | 1.55E−04 | POPTR_0006s10480 | FER1; ATFER1; ferric iron binding/iron ion binding |
LA-13 | SNP_IGA_13_111400 | 13 | 110,728 | 7.83E−05 | POPTR_0013s00340 | RCI2A (RARE-COLD-INDUCIBLE 2A)# |
LA-13 | SNP_IGA_8_2418643 | 8 | 2,403,351 | 8.24E−05 | POPTR_0008s04290 | Unknown protein |
SLA-13 | SNP_IGA_14_3311885 | 14 | 3,293,256 | 8.14E−05 | POPTR_0014s04150/POPTR_0014s04160 | Unknown protein/PEX11A (PEROXIN 11A) |
SLA-13 | SNP_IGA_19_2255781 | 19 | 2,244,885 | 1.53E−04 | POPTR_0019s02450 | SWIM zinc finger protein-related |
SLA-13 | SNP_IGA_6_23541394 | 6 | 23,399,832 | 1.73E−04 | POPTR_0006s24880 | PP2C; protein phosphatase 2C family protein |
CA-13 | SNP_IGA_6_3818713 | 6 | 3,794,879 | 7.31E−05 | POPTR_0006s05370 | Unknown protein |
CA-13 | PnCOL2_69 | 4 | 9,356,516 | 1.14E−04 | POPTR_0004s10800 | COL2 (constans-like 2); transcription factor/zinc ion binding# |
CA-13 | SNP_IGA_1_29550802 | 1 | 29,371,580 | 1.20E−04 | POPTR_0001s30950 | RD21 (responsive to dehydration 21); cysteine-type endopeptidase/cysteine-type peptidase |
CA-13 | LG_X_35_SNP_325 | 10 | 14,394,839 | 1.51E−04 | POPTR_0010s14950 | BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1); oxygen binding/steroid hydroxylase |
CA-13 | LG_X_35_SNP_490 | 10 | 14,395,004 | 1.51E−04 | POPTR_0010s14950 | As above |
CNPL-13 | SNP_IGA_13_111400 | 13 | 110,728 | 6.81E−06 | POPTR_0013s00340 | RCI2A (RARE-COLD-INDUCIBLE 2A) a |
CNPL-13 | SNP_IGA_6_12938719 | 6 | 12,856,743 | 8.11E−05 | POPTR_0006s15470 | Bacterial transferase hexapeptide repeat-containing protein |
CNPL-13 | SNP_IGA_8_2308644 | 8 | 2,294,048 | 1.07E−04 | POPTR_0008s04110 | AGL62 (Agamous-like 62); DNA binding/transcription factor |
CNPL-13 | SNP_IGA_6_23601531 | 6 | 23,459,494 | 1.32E−04 | POPTR_0006s24980 | Unknown protein |
CNPL-13 | SNP_IGA_10_18449865 | 10 | 18,340,999 | 1.37E−04 | POPTR_0010s20920 | Immunophilin, putative/FKBP-type peptidyl-prolyl cis–trans isomerase, putative |
CNPL-13 | SNP_IGA_7_14212007 | 7 | 14,130,925 | 1.72E−04 | POPTR_0007s14310 | AGL22 (Agamous-like 22); SVP; transcription factor/translation repressor, nucleic acid binding |
SD-13 | SNP_IGA_6_11135816 | 6 | 11,064,511 | 1.67E−04 | POPTR_0006s13890 | TES (TETRASPORE); microtubule motor |
SI-13 | SNP_IGA_6_8990445 | 6 | 8,932,413 | 1.24E−04 | POPTR_0006s11720 | DML1 (DEMETER-LIKE 1); DNA N-glycosylase/DNA-(apurinic or apyrimidinic site) lyase/protein binding |
SP-12 | SNP_IGA_1_31674244 | 1 | 31,482,266 | 1.60E−04 | POPTR_0001s33290 | Zinc finger (DHHC type) family protein |