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Table 1 Number of identified proteins in the proteome, and proteins with N-terminal secretion signal sequence at the six time points of P. radiata cultivation on spruce wood

From: Time-scale dynamics of proteome and transcriptome of the white-rot fungus Phlebia radiata: growth on spruce wood and decay effect on lignocellulose

Time (d) Number of identified proteinsa Number of secreted proteinsb (percentage of identified proteins)
0 89 31 (35 %)
7 1009 150 (15 %)
14 1077 163 (15 %)
21 1149 170 (15 %)
28 1151 170 (15 %)
42 1035 157 (15 %)
  1. The proteins were analyzed by peptide LC–MS/MS and identified by searching against translated gene models of P. radiata genome. The secreted proteins were recognized with Phobius prediction analysis [32]
  2. aProteins were identified from peptide LC–MS/MS analysis
  3. bSecreted proteins were identified with Phobius prediction